Query= MSMg01no485_p15.b1 MSMg01no485_p15.b1 CHROMAT_FILE:
MSMg01no485_p15.b1 PHD_FILE: MSMg01no485_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:08 2005
(637 letters)
>mm_chr14_77877833_77878871
Length = 1039
Score = 1185 bits (613), Expect = 0.0
Identities = 634/643 (98%), Gaps = 6/643 (0%)
Strand = Plus / Minus
Query: 1 cagtgaacatactagaaattatgttgtactcaacttcaatttatgtgtgtc--atttttt 58
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 691 cagtgaacatactagaaattatgttgtactcaacttcaatttatgtgtgtcttttttttt 632
Query: 59 tttacaatggtttaatgtttcctcaattcagtattctattcaggatttttttaaaaaaag 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tttacaatggtttaatgtttcctcaattcagtattctattcaggatttttttaaaaaaag 572
Query: 119 aattatcacagttgcacccattgttcaatcaaacacgatgccagacataagacacacaca 178
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 571 aattatcacagttgcacccattgttcaatcaaacacgatgccagtcataagacacacaca 512
Query: 179 gaggaagatgttgagaatgaagcagggtgacctccagcgtgattaccacttgggggtgac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gaggaagatgttgagaatgaagcagggtgacctccagcgtgattaccacttgggggtgac 452
Query: 239 tgctccacgctccaggctagggtgagcagcctgcttctgagcgggttttaatttttaatg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tgctccacgctccaggctagggtgagcagcctgcttctgagcgggttttaatttttaatg 392
Query: 299 cagtggaactggcttgatgaagctttcgcaccccgaggcctgccccatcacctgcctgcc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cagtggaactggcttgatgaagctttcgcaccccgaggcctgccccatcacctgcctgcc 332
Query: 359 ccagggcaggactatggatccgatgctcatggtcagcaacatgggatgaggctgtgtgtg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ccagggcaggactatggatccgatgctcatggtcagcaacatgggatgaggctgtgtgtg 272
Query: 419 ttgccatcccagggaccagtcatcagagtagagtgacatctgataatgaggtggtgtgtt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttgccatcccagggaccagtcatcagagtagagtgacatctgataatgaggtggtgtgtt 212
Query: 479 ccccttagatatattattattattattattattattattattatta-tta---ttattgg 534
|||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||
Sbjct: 211 ccccttagatatattattattattattattattattattattattatttattttttttgg 152
Query: 535 atgagaagcgatggacaagtaagggcattttaaaagatagaaaatgaggaggaatattta 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 atgagaagcgatggacaagtaagggcattttaaaagatagaaaatgaggaggaatattta 92
Query: 595 tgtttaaaataaatttctaataaataaacaacagcattacttc 637
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 tgtttaaaataaatttctaataaataaacaacagcattacttc 49
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1039
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1029
Effective search space: 645183
Effective search space used: 645183
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_p15.g1 MSMg01no485_p15.g1 CHROMAT_FILE:
MSMg01no485_p15.g1 PHD_FILE: MSMg01no485_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:08 2005
(640 letters)
>mm_chr14_77759658_77760696
Length = 1039
Score = 1046 bits (541), Expect = 0.0
Identities = 618/645 (95%), Gaps = 10/645 (1%)
Strand = Plus / Plus
Query: 1 ctgggagtccagatatctcttgagtgtgggcatggaggctggggactagagcacctgatc 60
||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||
Sbjct: 201 ctgggagtccagatatctc-tgagtgtgggcatggagggtgggggctagagcacctgatc 259
Query: 61 tgtttc--caggtgcagttatggattggaagcatgatgtgtcttcagcagggcagatagg 118
|||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgtttctgc--gtgcagttctggattggaagcatgatgtgtcttcagcagggcagatagg 317
Query: 119 tcctgagtaagctgggccccgtgggggtccctgttaggcaaggtatcgggacagggagtg 178
||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||
Sbjct: 318 tcctgagtaagctgggccccgtgggagtccctgttaggcaaggtattggggcagggagtg 377
Query: 179 tctcacctgtgagcctggttgtgatggatctcctggaagtcaagctgcctctgggagtat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tctcacctgtgagcctggttgtgatggatctcctggaagtcaagctgcctctgggagtat 437
Query: 239 gggagggtgtctggagtgcctgctttgccctgggctgagttgcaggctggaagtaagatg 298
|||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 438 gggagggtatctggagtgcccgctttgccctgggctgagttgcaggctcgaagtaagatg 497
Query: 299 tgtctttgggagggcagtgtagatcttgagttttcttaagtagttaacaaatgaatgtac 358
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgtctttgggagggcagtttggatcttgagttttcttaagtagttaacaaatgaatgtac 557
Query: 359 atgaaagaaaggaaaccaccacagcatttgaagtgccatgcatgaccaggttcatt-ggg 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 558 atgaaagaaaggaaaccaccacagcatttgaagtgccatgcatgaccaggttcatttggg 617
Query: 418 tgattc-tgtgatggtggagagccatgatgtaaagctgagataggcagctgcactagtgt 476
||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 -gat-cgtgtgatggcggagagccatgatgtaaagctgagataggcagctgcactagtgt 675
Query: 477 gggaagattgttcctattctgctaaaaaggtttccgcccatcctaagtagaagtttgaat 536
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 676 gggaagattgttcctattctgctaaaaaggtttctgtccatcctaagtagaagtttgaat 735
Query: 537 gaaagaatgtctctattcctgcatgtagtaatttaaggggaagtgcctctttcttagaac 596
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 736 gaaagaacgtctctattcctgcatgtagtaatttaaggggaagcgcctctttcttagaac 795
Query: 597 cttactggggcatcttccgtgtagaac-atgataaaatcaagagt 640
||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 796 cttactggggcatcttctgtgtagaaccatgataaaatcaagagt 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1039
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1029
Effective search space: 648270
Effective search space used: 648270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
