Query= MSMg01no485_p22.b1 MSMg01no485_p22.b1 CHROMAT_FILE:
MSMg01no485_p22.b1 PHD_FILE: MSMg01no485_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:09 2005
(584 letters)
>mm_chr14_118240616_118241599
Length = 984
Score = 1077 bits (557), Expect = 0.0
Identities = 572/577 (99%)
Strand = Plus / Minus
Query: 4 ggaattctttttgggctcagagccagaactcttcaacagtaactctggcttggggctggt 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ggaattctttttgggctaagagccagaactcttcaacagtaactctggcttggggctggt 633
Query: 64 gcgctcccacaaggccatgtgtgtttgagatgtctcacgtctgactgaccgctgtgagta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gcgctcccacaaggccatgtgtgtttgagatgtctcacgtctgactgaccgctgtgagta 573
Query: 124 acctatttattattttgacattgcaacgaaaccacaaggggagaggcattttctctgctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 572 acctatttattattttgacattgcaacgaaaccacaaggggagaggcattttccctgctt 513
Query: 184 ctgtctggctcggttaaccacgttctcggggtagaaaagacaaattgattgaaagcagag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ctgtctggctcggttaaccacgttctcggggtagaaaagacaaattgattgaaagcagag 453
Query: 244 gcacaggggtacaagaaccttctatccgatcttcacagcaatctctctagctgtgactgt 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gcacaggggtacaagaaccttctatccgatcttcacagcaatctctctagctgtgactga 393
Query: 304 cttcccttttaatcaattaatgcttgtgctaaaggtcactgtaggataattgaatgtcaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cttcccttttaatcaattaatgcttgtgctaaaggtcactgtaggataattgaatgtcaa 333
Query: 364 agtcagtagagggttaattgtagaacaagggttaggtaagtggatggcacgttaaatatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 agtcagtagagggttaattgtagaacaagggttaggtaagtggatggcacgttaaatatt 273
Query: 424 tatatctggaaatggaaatcatgcttccatcctctgatctagtcttttaaaccttttctt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tatatctggaaatggaaatcatgcttccatcctctgatctagtcttttaaaccttttctt 213
Query: 484 ccagtttgctttctgttgctatgttaaacgccccaaagcaaccggaatgaaaggggttat 543
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 212 ccagtttgctttctgttgctatgttaaacgccccaaagcaactggaatgaaaagggttat 153
Query: 544 ttcatctatcttctagcttacagcccattatcaaagg 580
|||||||||||||||||||||||||||||||||||||
Sbjct: 152 ttcatctatcttctagcttacagcccattatcaaagg 116
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_p22.g1 MSMg01no485_p22.g1 CHROMAT_FILE:
MSMg01no485_p22.g1 PHD_FILE: MSMg01no485_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:09 2005
(251 letters)
>mm_chr14_118078918_118079568
Length = 651
Score = 426 bits (220), Expect = e-124
Identities = 248/270 (91%), Gaps = 20/270 (7%)
Strand = Plus / Plus
Query: 1 cttttctcttttgttctagttttctgtctttcttcctttgcctgtttttttttttttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttttctcttttgttctagttttctgtctttcttcctttgcctgtttttttttttttttt 240
Query: 61 ttttttttttttttt--------------------agaatgaccaaatacgactttctct 100
||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 241 tttttttttttttttttttttttttttttttttttagaatgaccaaatatgactttctct 300
Query: 101 tgtgtggactttcaaatgtccttgtccatctgacctagtcacttactcacactttgttgt 160
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 301 tgtgtggactttcaaatgtccttgtccatctgacctagtcacttactcatactttgttgt 360
Query: 161 tgacagaagcttcagggcagcattaaacagtgattccccagcagcatgcagtcgtgtcct 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgacagaagcttcagggcagcattaaacagtgattccccagcagcatgcagtcgtgtcct 420
Query: 221 ttgtgagtcacttctttcccaaggtcctgg 250
||||||||||||||||||||||||||||||
Sbjct: 421 ttgtgagtcacttctttcccaaggtcctgg 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
