TTTTNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCATATATATATATATAAAATTCAAAAAGATTAACAGTT
CTTGTGACTCTTGATATTTGAAATTAAATCTGTTAAATACTTAAGAGTTT
ATGCTCATTACTCTTAAATATTATAGTCGTTCTTAGAATTTAGAAATCAC
TAGGTCCTAACTTTAATGCATTTACAAAGAAGACATTCACAGTTAAAATA
TTTTGATAGTTTTATTTGTTTTGTAATTTGGTGTGTTTTACACGAGCTGT
TAGAAATAGTTCTCTCAAAGCGGTTCACAGATGTCACTAAATTGTGAGTG
GAATCCACATTACAAAAAAAACCCTTGAAGAAGCTCTCAATGTATGCTGT
TATTAAAGCTCTAAGTGAATGCGAGAATTAGGGAGATCTTGTTGACCTGA
AACCTGATACACATATTTTGATAAAACAAAGAAGCTAGGCTAAGATAGAT
AGCTCATCTGTAGCTAGGGGAATGGGGCATGTGGTAGACCAAGCAAGAAC
TCAGTATAAACCTCAAAACTAGCTGTTCTAACTGGACCCTAGTTTAGTCC
CCAGCGCGCGCGCGTGTGCGCGCGCACACACACACACACACACACGAGGC
AGCTCACAAATGTTTGTAACTCCAACTCTGGGGGATCTGACACACTCACA
CAGAGAAAGATGCAAGCAAAACACCAGGGCTCCTAAAATAAAAATAAATA
AAT

TCCACCGTGAAAGGAGGGGGGGTTTCATACGAGAGGGGNGGGGGGTTCAA
AACAAGGGGGAGGGGGAAAGGAACGGGGAGACGACAGGGGTTCCCCCGGG
AGACGGTACGCAGTCGCACCTCCGTGTGTACGGGGGGGGAGCGTGCGGGA
AGGAGCCAGCCGCGTGGCCTTGCTCGACGGGCACCGTACGATATACTTTT
TACGTGGCTCCACGCGAGCTCAGGCTGGCCGCAACTGACACACCGCAAAC
TTTTTTTTTTCACGAACTACCTACACATCCCCAATTCTCTCCCCACTAAT
ACCATCCCCTGTCACCACGAACGACGAATGAAACCCCCCCCACCAACTCC
CCCACCACGTAAGAAAAAGCAAGCCACAACCCCCCTTATCCACACCCCCC
ACACTCCCGTATCTACCCCCAACAAACCACCAACACACCCAAAATCAACC
TAATAGACCCACCCCAAACCCCCCGCTTCACCATACAACACACACACACC
AACCCATACCCTAATCCCAAACACACCACCCCCCTTAAACCCCAAACACT
ACCTAAACTCCCCGACCCCTCAGACCATGACTATACACCCCCAATAAATC
AACCAACAACTCCACAACAAGTCGTACACCTTCACACTACAACCCCTCAC
CCATACATGGTACCCCCTAAGTCCACAACCCCCCAAATAAACCACACCCG

Query= MSMg01no486_e23.b1 MSMg01no486_e23.b1 CHROMAT_FILE:
MSMg01no486_e23.b1 PHD_FILE: MSMg01no486_e23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:35 2005
         (636 letters)



>mm_chr14_99522427_99523462
          Length = 1036

 Score = 1224 bits (633), Expect = 0.0
 Identities = 633/633 (100%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcatatatatatatataaaattcaaaaagattaacagttcttgtgactcttgata 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatatatatatatataaaattcaaaaagattaacagttcttgtgactcttgata 263

                                                                       
Query: 64  tttgaaattaaatctgttaaatacttaagagtttatgctcattactcttaaatattatag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttgaaattaaatctgttaaatacttaagagtttatgctcattactcttaaatattatag 323

                                                                       
Query: 124 tcgttcttagaatttagaaatcactaggtcctaactttaatgcatttacaaagaagacat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcgttcttagaatttagaaatcactaggtcctaactttaatgcatttacaaagaagacat 383

                                                                       
Query: 184 tcacagttaaaatattttgatagttttatttgttttgtaatttggtgtgttttacacgag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcacagttaaaatattttgatagttttatttgttttgtaatttggtgtgttttacacgag 443

                                                                       
Query: 244 ctgttagaaatagttctctcaaagcggttcacagatgtcactaaattgtgagtggaatcc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgttagaaatagttctctcaaagcggttcacagatgtcactaaattgtgagtggaatcc 503

                                                                       
Query: 304 acattacaaaaaaaacccttgaagaagctctcaatgtatgctgttattaaagctctaagt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acattacaaaaaaaacccttgaagaagctctcaatgtatgctgttattaaagctctaagt 563

                                                                       
Query: 364 gaatgcgagaattagggagatcttgttgacctgaaacctgatacacatattttgataaaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaatgcgagaattagggagatcttgttgacctgaaacctgatacacatattttgataaaa 623

                                                                       
Query: 424 caaagaagctaggctaagatagatagctcatctgtagctaggggaatggggcatgtggta 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caaagaagctaggctaagatagatagctcatctgtagctaggggaatggggcatgtggta 683

                                                                       
Query: 484 gaccaagcaagaactcagtataaacctcaaaactagctgttctaactggaccctagttta 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaccaagcaagaactcagtataaacctcaaaactagctgttctaactggaccctagttta 743

                                                                       
Query: 544 gtccccagcgcgcgcgcgtgtgcgcgcgcacacacacacacacacacacgaggcagctca 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gtccccagcgcgcgcgcgtgtgcgcgcgcacacacacacacacacacacgaggcagctca 803

                                            
Query: 604 caaatgtttgtaactccaactctgggggatctg 636
           |||||||||||||||||||||||||||||||||
Sbjct: 804 caaatgtttgtaactccaactctgggggatctg 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space:   642276
Effective search space used:   642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)