Query= MSMg01no486_f01.b1 MSMg01no486_f01.b1 CHROMAT_FILE:
MSMg01no486_f01.b1 PHD_FILE: MSMg01no486_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:35 2005
(677 letters)
>mm_chr14_68725707_68726783
Length = 1077
Score = 886 bits (458), Expect = 0.0
Identities = 464/466 (99%)
Strand = Plus / Minus
Query: 4 ggaattcctctctgtgatgaggtatagaaaccagcagagacaactttggaaggcttaggg 63
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 466 ggaattcctctctgtgatgaggtatagaaaccagcagagacaactttggaaagcttaggg 407
Query: 64 aagaggaggaaaacattggttcagccatggaaattgccaccgggtattataatggatggc 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aagaggaggaaaacactggttcagccatggaaattgccaccgggtattataatggatggc 347
Query: 124 aactcaagggaaactactacagacacagtgcttcttgtttagtgtggaatatgtgcctct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aactcaagggaaactactacagacacagtgcttcttgtttagtgtggaatatgtgcctct 287
Query: 184 tataccttagcagcatgatgaggaaggatggcagtgttttaagaagtcaaatgcactgtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tataccttagcagcatgatgaggaaggatggcagtgttttaagaagtcaaatgcactgtt 227
Query: 244 catacggttgtggtggtagtgactgtcttagtgtgcctttgcttcaaagagacaccatgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 catacggttgtggtggtagtgactgtcttagtgtgcctttgcttcaaagagacaccatgg 167
Query: 304 ccacagccactcttctaaaaggaagcatttacttagagcttgcttattgtttcagaggtt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ccacagccactcttctaaaaggaagcatttacttagagcttgcttattgtttcagaggtt 107
Query: 364 tagtccattagcatcatggcagggatcatggtgacacagaggcagacatggtggtagaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tagtccattagcatcatggcagggatcatggtgacacagaggcagacatggtggtagaga 47
Query: 424 agtagctgagagttcgacatcttgatccaaagaaaacaggaaaaga 469
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 agtagctgagagttcgacatcttgatccaaagaaaacaggaaaaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_f01.g1 MSMg01no486_f01.g1 CHROMAT_FILE:
MSMg01no486_f01.g1 PHD_FILE: MSMg01no486_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:35 2005
(525 letters)
>mm_chr14_68590077_68591001
Length = 925
Score = 893 bits (462), Expect = 0.0
Identities = 510/526 (96%), Gaps = 5/526 (0%)
Strand = Plus / Plus
Query: 1 tcactccccctcagctccccccaccacacacacacacacaaagcatctcggattgtattt 60
||||||||||||||| |||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 204 tcactccccctcagc-cccccc-cc-cccacacacacacaaagcatctcggattgtattt 260
Query: 61 tcctggagtggtgctccgggtgctttgctaaagcccagcactcaacagcagcagggtagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctggagtggtgctccgggtgctttgctaaagcccagcactcaacagcagcagggtagg 320
Query: 121 ataaacagggtgggataagcttcaccagttttgccttccttgcggctatgcccacacccc 180
|||||| |||||||||||| ||| |||||||||||||||||| |||||||||||||||||
Sbjct: 321 ataaacggggtgggataagattccccagttttgccttccttgaggctatgcccacacccc 380
Query: 181 aacagcagggtggaacccagacccacatctgtctatattttttccctattgtgatttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacagcagggtggaacccagacccacatctgtctatattttttccctattgtgatttttc 440
Query: 241 acttttctgtagacatacctatacaattatgtctaacaaagctttcataaaatttgcatt 300
|||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 441 acttttctatagacatacctatacaattacgtctaacaaagccttcataaaatttgcatt 500
Query: 301 tcaaacctgtgattaaaagctttattggtggagcctggagagatggctcagtgattaaga 360
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 acaaacctgtgattaaaagctttattggtggggcctggagagatggctcagtgattaaga 560
Query: 361 gcactgactgctcttccaggggtcctgagttcaattcccagcaaccacatggtggctcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcactgactgctcttccaggggtcctgagttcaattcccagcaaccacatggtggctcac 620
Query: 421 aaccatctataatgggatctgctgtcctcttctggtgtgtctgaagacagagacagtgta 480
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaccatctataatgggatctgatgtcctcttctggtgtgtctgaagacagagacagtgta 680
Query: 481 ataacgccttatc-ggagggcgtgagaggtggttcagtagtagcta 525
||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 681 ataacgcctta-ctggagggcgtgagaggtggttcagtagtagcta 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
