Query= MSMg01no486_f08.b1 MSMg01no486_f08.b1 CHROMAT_FILE:
MSMg01no486_f08.b1 PHD_FILE: MSMg01no486_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:37 2005
(637 letters)
>mm_chr14_49513196_49514233
Length = 1038
Score = 1197 bits (619), Expect = 0.0
Identities = 631/635 (99%), Gaps = 1/635 (0%)
Strand = Plus / Minus
Query: 4 gaattctaag-aattccggccagcagcctatttctgggctgctttgcacaggcaggagca 62
|||||||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 gaattctaagaaaatgaggccagcagcctatttctgggctgctttgcacaggcaggagca 779
Query: 63 ggacacacaggtcatgggtagccgtgatcagtatatgacttttaggaaattaaatgtagg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ggacacacaggtcatgggtagccgtgatcagtatatgacttttaggaaattaaatgtagg 719
Query: 123 aacccaaaaggatttcaaagcatttatccacaggtggaaaatcagaattcttcaggcaca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aacccaaaaggatttcaaagcatttatccacaggtggaaaatcagaattcttcaggcaca 659
Query: 183 tggtgacctgccccagcctataggatcagaatcctctatgtcctggtgttgagggcaggg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tggtgacctgccccagcctataggatcagaatcctctatgtcctggtgttgagggcaggg 599
Query: 243 gctcagttaggattccacactgattactgtgtcgagcccgggaccctgaagaaccgggca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gctcagttaggattccacactgattactgtgtcgagcccgggaccctgaagaaccgggca 539
Query: 303 gaaatggtttttctagagaactgctctgtttatttcttcggggtcttgtgagagttgagg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gaaatggtttttctagagaactgctctgtttatttcttcggggtcttgtgagagttgagg 479
Query: 363 agagaaagaaagaatgtggaaatgattccgatggagaacaaggaagaaggctctcctcct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 agagaaagaaagaatgtggaaatgattccgatggagaacaaggaagaaggctctcctcct 419
Query: 423 tcctgcatcagccttccctggatgtgggggaagggaaaccagttcacagataacctcaga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tcctgcatcagccttccctggatgtgggggaagggaaaccagttcacagataacctcaga 359
Query: 483 atacacaaacagcgccctcagtaaccaaaagagcaccaagatgataatgacggctggctg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 atacacaaacagcgccctcagtaaccaaaagagcaccaagatgataatgacggctggctg 299
Query: 543 gtcccgcttcaagagcactgggcttttgccctcagcatatacaatttctttctctctgaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gtcccgcttcaagagcactgggcttttgccctcagcatatacaatttctttctctctgaa 239
Query: 603 cacagtcccccacacctcccaagaatgtttgtagt 637
|||||||||||||||||||||||||||||||||||
Sbjct: 238 cacagtcccccacacctcccaagaatgtttgtagt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1038
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1028
Effective search space: 644556
Effective search space used: 644556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_f08.g1 MSMg01no486_f08.g1 CHROMAT_FILE:
MSMg01no486_f08.g1 PHD_FILE: MSMg01no486_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:37 2005
(564 letters)
>mm_chr14_49334446_49335409
Length = 964
Score = 1091 bits (564), Expect = 0.0
Identities = 564/564 (100%)
Strand = Plus / Plus
Query: 1 acagagacctgcctgactctgcctcctgaatgctgggactaagtcaggtgccaccacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagagacctgcctgactctgcctcctgaatgctgggactaagtcaggtgccaccacaca 260
Query: 61 tagattatcttggttcttgtttgtttgtttgtttgggttgcagttgtttttctgtttgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagattatcttggttcttgtttgtttgtttgtttgggttgcagttgtttttctgtttgat 320
Query: 121 agagtctttcctaaacgtgatctggacttttctacattcccaaggatcaatttgaactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagtctttcctaaacgtgatctggacttttctacattcccaaggatcaatttgaactct 380
Query: 181 tggtcctttgatctctatttcccaagtaccgggatcactggacaggcatgtaccaacatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtcctttgatctctatttcccaagtaccgggatcactggacaggcatgtaccaacatg 440
Query: 241 cttggcagggtttcattttgtgtaaatttccaattgtccaatgtgacgagtggcaggatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttggcagggtttcattttgtgtaaatttccaattgtccaatgtgacgagtggcaggatt 500
Query: 301 tgtaacgcctttggttgttctaatgagcaccgtgatgagagagctacatttctggcttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtaacgcctttggttgttctaatgagcaccgtgatgagagagctacatttctggcttaa 560
Query: 361 gttaccccgtgttccatatttgtcttttgctgctatgcgcctccgctctccagttctcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttaccccgtgttccatatttgtcttttgctgctatgcgcctccgctctccagttctcac 620
Query: 421 aggatgccttgctctccttaggtccatgcacttatcacactttggagaaagtgcatgttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggatgccttgctctccttaggtccatgcacttatcacactttggagaaagtgcatgttg 680
Query: 481 agacttcagttggcattgcttatcatttttgtatgcacctggagagatgtgatctacttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agacttcagttggcattgcttatcatttttgtatgcacctggagagatgtgatctacttt 740
Query: 541 ctgttgagctttcaatccttaacc 564
||||||||||||||||||||||||
Sbjct: 741 ctgttgagctttcaatccttaacc 764
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
