Query= MSMg01no486_k03.b1 MSMg01no486_k03.b1 CHROMAT_FILE:
MSMg01no486_k03.b1 PHD_FILE: MSMg01no486_k03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:59 2005
(580 letters)
>mm_chr14_31054119_31055099
Length = 981
Score = 1038 bits (537), Expect = 0.0
Identities = 570/581 (98%), Gaps = 1/581 (0%)
Strand = Plus / Plus
Query: 1 ctctttcatttagcatgcagcccagggctgttccccacttggaaggttcagaatggctct 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 ctctttcatttagcatgcagcccagggctgttcctcacttggaaggttcagaatggctct 260
Query: 61 ctgatgagctgtctgcccacatgacggccagtcatcccagtgcctggtcactggcatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgatgagctgtctgcccacatgacggccagtcatcccagtgcctggtcactggcatcct 320
Query: 121 gcagtcattgctctgtgggctccatttttatctgcatgggaacctaaagtgatacaaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagtcattgctctgtgggctccatttttatctgcatgggaacctaaagtgatacaaacc 380
Query: 181 aggattcccaaattacctactcttaactcccttagcggccgttctcacttcccacttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggattcccaaattacctactcttaactcccttagcggccgttctcacttcccacttctc 440
Query: 241 accctgtttaatagtctccattgtcacaggcaagggatccagtcagccggtaaaaactga 300
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accctgttaaagagtctccattgtcacaggcaagggatccagtcagccggtaaaaactga 500
Query: 301 cctcaataagaaatagagccaagctctcagtccgaagcttccggtgcccgacgacactga 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 cctcaataagaaatagagccaagctctcagtccgaagcttccggtgcctgacgacactga 560
Query: 361 gaactgcttttggacaaatctgcttgtgcagtctctcccatgttacctgatggaagttta 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 gaactgcttttggacaaatctgcttatgcagtctctcccatgttacctgatggaagttta 620
Query: 421 tttaaatgtacgcatctgctgtcagaccctcaatttaatccatgcttcattaaatataac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttaaatgtacgcatctgctgtcagaccctcaatttaatccatgcttcattaaatataac 680
Query: 481 ccactgactgataaaccatgcaagcagaggtttcaaaatactggaccataaatcagaata 540
|||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 681 ccactgactgctaaaccatgcaagcggaggtttcaaaatactggaccataaatgagaata 740
Query: 541 acatttaaaaaaatctgtgaaggacaaaaaaaaaa-caaca 580
||||| |||||||||||||||||| |||||||||| |||||
Sbjct: 741 acattaaaaaaaatctgtgaaggaaaaaaaaaaaaacaaca 781
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 981
Length adjustment: 10
Effective length of query: 570
Effective length of database: 971
Effective search space: 553470
Effective search space used: 553470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_k03.g1 MSMg01no486_k03.g1 CHROMAT_FILE:
MSMg01no486_k03.g1 PHD_FILE: MSMg01no486_k03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:59 2005
(681 letters)
>mm_chr14_31242873_31243953
Length = 1081
Score = 1191 bits (616), Expect = 0.0
Identities = 666/690 (96%), Gaps = 12/690 (1%)
Strand = Plus / Minus
Query: 1 catttcgagtggtgctcccagatgcttcatctctaccgaaccaggaacaggatttgagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 catttcgagtggtgctcccagatgcttcatctctaccgaaccaggaacaggatttgagaa 631
Query: 61 aagtggctgcagctctgctgctgagggtgtgtccttgttctagagtctgaagctctgctg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 630 aagtggctgcagctctgctgctgagggtgtgtccttgttctagagtctgaagctctactg 571
Query: 121 ttggcatctcccccgggtgtgtccccaaatccttatcacggcttttcagtctgcctgctg 180
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 570 ttgggatctcccccgggtgtgcccccaaatccttatcacggcttttcagtctgccggctg 511
Query: 181 cgctgcgtggacacagagagaagctgcttcccttgcagctcagtcctgctacagaactct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cgctgcgtggacacagagagaagctgcttcccttgcagctcagtcctgctacagaactct 451
Query: 241 ttcttgtgctggattcctctcgaaactggtgaccacgtcatctggtccatgggttccggt 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ttcttgtgctggattcctctcaaaactggtgaccacgtcatctggtccatgggttccggt 391
Query: 301 ggcatcagtggtatgaagttatgtgtttttcaaacccaaagaaatgtacttagcattgtt 360
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 390 ggcatcagtggtatgaagttatgtgtttttcaaacccaaagaaatgtactcagcatcgtt 331
Query: 361 tctttcttttacgtttaaatttatttatttttgtctttactgaggtacagggtgccacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tctttcttttacgtttaaatttatttatttttgtctttactgaggtacagggtgccacca 271
Query: 421 tttgtctttcactttggaggatacacgttggcataccagagataactgattttattggtg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cttgtctttcactttggaggatacacgttggcataccagagataactgattttattggtg 211
Query: 481 tggcagactgtgtagtctctcctcccccagcctgaaacctgcttgctcaggggtggagct 540
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tggcagactgtgtagtctcccctcccccagcctgaaacctgcttgctcaggggtggagct 151
Query: 541 tcctgctcattcgttctgccacgcccactgctggaccgtgccgctttgctgttggcggcc 600
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 150 tcctgctcattcgttctgccacgcccactgctggaccgtgcggctttgctgttggcggcc 91
Query: 601 gcaacaagattgtactgtttgcagggtttctctcccaccctctggaggacata------- 653
||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 90 gcaacaagactgtactgtttgcagggcttctctcccaccctctggaggacatacttgttt 31
Query: 654 -----cttaatgtggtaggcagctgactag 678
|||||||||||||||||||||||||
Sbjct: 30 aagaccttaatgtggtaggcagctgactag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
