Query= MSMg01no487_b10.b1 MSMg01no487_b10.b1 CHROMAT_FILE:
MSMg01no487_b10.b1 PHD_FILE: MSMg01no487_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:35 2005
(381 letters)
>mm_chr14_75908402_75909183
Length = 782
Score = 648 bits (335), Expect = 0.0
Identities = 370/385 (96%), Gaps = 7/385 (1%)
Strand = Plus / Plus
Query: 1 ctctcttagccttcgctcctcagaatcctcacaccctttaatcttcagttgtttcaatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctcttagccttcgctcctcagaatcctcacaccctttaatcttcagttgtttcaatgg 260
Query: 61 ctctgccatctcttgcttcattgagaccccccctggccttcatagctgtatctcctgtaa 120
||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||
Sbjct: 261 ctctgccatctcttgcttccttgagacttctcctggccttcatagctgtatctcctgtaa 320
Query: 121 attctgtcctctgatgctttttt----aaaaatcttcagtctcttcctagtgttaagact 176
|||||||||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 321 attctgtcctttgatgcttttttttttaa---tcttcagtctcttcctagtgttaagact 377
Query: 177 ctgagctttggtattcaaagccctcagcacttggtggctctctggaactgatcacaatct 236
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 378 ctgagctttggtattcaaagccctcagcacttggtggctctctggaattgatcacaatct 437
Query: 237 cttagcatttccaaatgaactttttctggaattctgttagccattcctttgctatggtgg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cttagcatttccaaatgaactttttctggaattctgttagccattcctttgctatggtgg 497
Query: 297 tcactgccaaggatagaaaccctggggtttggttcgttctattggtgtgatggtttgaaa 356
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 498 tcactgccaaggatagaaaccctggggtttggttcgttctatgggtgtgatggtttgaaa 557
Query: 357 tatgctgggcccagggagtggatta 381
|||||||| ||||||||||||||||
Sbjct: 558 tatgctggacccagggagtggatta 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 782
Length adjustment: 9
Effective length of query: 372
Effective length of database: 773
Effective search space: 287556
Effective search space used: 287556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_b10.g1 MSMg01no487_b10.g1 CHROMAT_FILE:
MSMg01no487_b10.g1 PHD_FILE: MSMg01no487_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:36 2005
(408 letters)
>mm_chr14_76096037_76096841
Length = 805
Score = 731 bits (378), Expect = 0.0
Identities = 400/408 (98%), Gaps = 3/408 (0%)
Strand = Plus / Minus
Query: 1 caggggtaaccactaagccttctctgtgcccagcctcagattcagtttaacttccccctc 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 605 caggggtaaccactaagccttttctgtgcccagcctcagattcagtttaactt-cccctc 547
Query: 61 acaaactctattttttaacccctaagaaaggagctacaacaggtctggactacaagccga 120
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 546 acaaaccctattttttaacccctaagaaaggagttacaacaggtctggactacaagccga 487
Query: 121 ctctcagagactttgtatgtgtcctgccctgaggtttctccttccccaagacatgcagtg 180
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ctctcagagactttgta--tgtcctgccctgaggtttctccttccccaagacatgcagtg 429
Query: 181 gaggcctgagacagtttggtggctgccctaaaaccaggtttgagagtccttttcactgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gaggcctgagacagtttggtggctgccctaaaaccaggtttgagagtccttttcactgag 369
Query: 241 gtccttgagcaccacctggacctctgctataaagttttccaaatcaggcatcgtcaggag 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 368 gtccttgagcaccacctggacctctgctataaagttttccaaatcaggcagcgtcaggag 309
Query: 301 actcagactcctagccattttctccagaaggacttggatcttccataatgttgggcgggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 actcagactcctagccattttctccagaaggacttggatcttccataatgttgggcgggg 249
Query: 361 gtctgtctccaggaccaccctctgcatcaaggcttggtgcactgtttc 408
||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 248 gtctgtctccaggaccaccctctccatcaaggcttggtgcactgtttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 805
Length adjustment: 9
Effective length of query: 399
Effective length of database: 796
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
