Query= MSMg01no491_o21.b1 MSMg01no491_o21.b1 CHROMAT_FILE:
MSMg01no491_o21.b1 PHD_FILE: MSMg01no491_o21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:00 2005
(601 letters)
>mm_chr14_83043452_83044451
Length = 1000
Score = 1081 bits (559), Expect = 0.0
Identities = 588/598 (98%), Gaps = 3/598 (0%)
Strand = Plus / Minus
Query: 5 gaattctcacctccctgcaatg-agtataggaagcatactgccttcttagcacttatatt 63
||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 998 gaattctcacctccc-ggaatgcagtataggaagcatactgccttcttagcacttatatt 940
Query: 64 tgtgtccattaatgctaataaaaatattcttgaagcaagaagagattatttgtttaatgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 tgtgtccattaatgctaataaaaatattcttgaagcaagaagagattatttgtttaatgc 880
Query: 124 atgatgccacttcagtagctcatcttacctttctttcttttataaatttttttaattttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 879 atgatgccacttcagtagctcatcttacctttctttcttttataaattttttttattttt 820
Query: 184 attttatttcattttttatgactagaggaagctctctgtgatttaattttggtatggagc 243
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 819 attttattttattttttatgactagagaaagctctctgtgatttaattttggtatggagc 760
Query: 244 atagtcagtgtttcttctttgattcacagtaattatgcaaagagtaaatagcacttatat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 atagtcagtgtttcttctttgattcacagtaattatgcaaagagtaaatagcacttatat 700
Query: 304 tttgtctacagtcactttatttttccactgaacctcacatttgtaaatggctgcatactc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 699 tttgtctacagtcactttatttttccactgaacctcacatttgtaaatggctgcatattc 640
Query: 364 tgcatagtgtctgtcagcttctgtagacagagtaaagtgttctttctctctttgaatact 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tgcatagtgtctgtcagcttctgtagacagagtaaagtgttctttctctctttgaatac- 581
Query: 424 ttttttttcctgctttacaatacatgaatgtcctgatgtcacaatgatccatcatctgct 483
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ttttttttcctgctctacaatacatgaatgtcctgatgtcacaatgatccatcatctgct 521
Query: 484 ttgtacgttcctggtagaattattttggatcgaattcaagagtgtaaattttggaacatt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ttgtacgttcctggtagaattattttggatcgaattcaagagtgtaaattttggaacatt 461
Query: 544 tacttcttttttgttctactcangatgcttgtgtggatgtgtgtgttttatgtgtatt 601
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 460 tacttcttttttgttctactcaggatgcttgtgtggatgtgtgtgttttatgtgtatt 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1000
Length adjustment: 10
Effective length of query: 591
Effective length of database: 990
Effective search space: 585090
Effective search space used: 585090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_o21.g1 MSMg01no491_o21.g1 CHROMAT_FILE:
MSMg01no491_o21.g1 PHD_FILE: MSMg01no491_o21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:00 2005
(643 letters)
>mm_chr14_82898948_82899990
Length = 1043
Score = 1183 bits (612), Expect = 0.0
Identities = 636/644 (98%), Gaps = 1/644 (0%)
Strand = Plus / Plus
Query: 1 agttttatgtagaaggcaagtgggcaaggagaaatcctgtcttcaagaagacaagaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 agttttatgtagaaggcaagtgggcaaggagaaatcctgtcttcaagaagacaagaaaaa 259
Query: 61 ttattttaaagctttaattatcaatatgagaagggaaagagataggccaatggaacataa 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 260 ttattttaaagctttaattatcaatataagaagggaaagagataggccaatggaacataa 319
Query: 121 tgcagcttcaaagagtccccacatttgaagaaccctagatgtcttacaaattgtgggaaa 180
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgcagtttcaaagagtccccacatttgaagaaccctagatgtcttacaaattgtgggaag 379
Query: 181 ttgtggaaagggaaatggatgatatttccaaagttttatgctatatggtttaaatgccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttgtggaaagggaaatggatgatatttccaaagttttatgctatatggtttaaatgccaa 439
Query: 241 taaaaaaggttatccattaagtcaggcatggtggctcacacctttaatcccagcactcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taaaaaaggttatccattaagtcaggcatggtggctcacacctttaatcccagcactcag 499
Query: 301 gaggcagaggcaggcggatttctgagttcgaggccagcctggtctacaaagtgagttcca 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaggcagaggcaggcagatttctgagttcgaggccagcctggtctacaaagtgagttcca 559
Query: 361 ggacagccagtgctatacagagaaaccctgtctcaaaaaacaaaaaa-caaaacaacaca 419
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 560 ggacagccagtgctatacagagaaaccctgtctcaaaaaacaaaaaaacaaaacaacaca 619
Query: 420 aaaatgttatccattaacaaaacaagaaaactccattcatacttatttgtttaagatata 479
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 620 aaaatgttatccattaacaaaacaagaaaattccattcatgcttatttgtttaagatata 679
Query: 480 caaaattcatggattctagaatatacatgatgtctttaccttatttcaacacattaaaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 caaaattcatggattctagaatatacatgatgtctttaccttatttcaacacattaaaga 739
Query: 540 tattgtctatatctatagacaataatcacaatgacaatgcaatgaagtattttatctaaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tattgtctatatctatagacaataatcacaatgacaatgcaatgaagtattttatctaaa 799
Query: 600 aatcatattaagcatatgaaattaaaataaaatataactcacat 643
||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 800 aatcatattaagcatatgaaattaaaacaaaatataactcacat 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
