CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGG
AATTCCATGCATCTTATCAGATCACCACGGACTAAGGCTGATCTGCATTA
GCAAGAATAAACAACAGAAAGCCCACATGACATGGAAGCTGAACAACATT
CCACTCAAAAATAACTTGGTCAAGAAATTAACAAAGAAATTAAAGACTCT
TTAGAATTTAATGAAAATGTAGGCGCAACATACACAAACTTATGGGACAC
AATGAAATTTTATGAAGTTGTTTTTTTTAATAACTGAGTAGCATAACACA
TTTTCTGTTTCCATTCCTCTGTTGCGGGAAATCTAGTTTTATTTTCACCT
TCTGGCTATGACAAATATTGCTATTATGAACCTAGTGAAGCACCTACATT
TAATACACGGTGCGGTGCAGCATCTTCTGGGTATGTGCCCAGGAGAGGTA
TATCTGGGTCCTTAGGTAGTACTATGTACAATTTTCTGAAGAATCACCAG
ACTGATTTCCAAAATGGTTTTACTAGCTTGCAATCCCACCAAGAGTGGAA
GAGTGTCCTTCTTCCTAGAAATCCTTACCAGCATCTACCGTCACCTGAGT
TTTTTATCTTAGCCATTCTGACTGGTGTAAAGTGGAATCTCAAAGTTATT
TTGATTTGCATTTCCCTGATGACTAAGCATGTTGAACATTTCTTTAATTG
CTTCTCAGCTATCCAGTATTCCTCAGCTGAGAATTCTTT

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTGTTTGCTAATTTTTCTTAGTTAATTCAA
CAACATATGACATTACATTAAAGAATAATTAGTTTCTATTTGAAGATTAC
ATAGATGCTTCCCAAACACACAGTTAAATGGAATTCAGTTTTCTTGCTTT
TTTTCTTTGTTTTTTCATAACTTTTATTATTAATCAGTTTAATAATGAGG
TATCATCATATCTCACACAATCCAACCACAGTGAATCTCTTGCTTCCTGT
CAAAATCGTAGCCTCTTTTCTATTAATCATTAATGTTACGAAAACACACA
TATATATGTGTGTATTCTCATGCCTATACACATGTAGGAAAGAAGAGGAT
ATATAAATAGTCATCTACAGAAACGAATAAATACATAAATACAACCTGCT
GAGTCAGTTTCTAATTCAGTTTCACAGTAATAAACCATGAGAAACAAAGA
AATTCTATAATTCCACACTCAGGCAAGTATTAGGCAATGCTTTATTTATA
TTAATTTGATTATAACATTTTAGAAAATAATTTTGTATGTATTAATTCAA
CTAGCTCAATTTATATGAAATCATTACAATATTATTTATAATTGCTGCAG
GCATTTTCAGTGAATTTCTTTACTTTGTTTCTCTAGTTAAATATGTATTT
GCATATATAAGTAGCTTCTGTTTATATCCAAATACTTTCA

Query= MSMg01no493_i14.g1 MSMg01no493_i14.g1 CHROMAT_FILE:
MSMg01no493_i14.g1 PHD_FILE: MSMg01no493_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:07 2005
         (669 letters)



>mm_chr14_112716552_112717619
          Length = 1068

 Score = 1257 bits (650), Expect = 0.0
 Identities = 662/666 (99%), Gaps = 1/666 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtttgctaatttttcttagttaattcaacaacatatgacattacattaaagaataatta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tgtttgctaatttttcttagttaattcaacaacatatgacattacattaaagaataatta 606

                                                                       
Query: 61  gtttctatttgaagattacatagatgcttcccaaacacacagttaaatggaattcagttt 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 605 gtttctatttgaagattacatagatgcttcccaaacatacagttaaatggaattcagttt 546

                                                                       
Query: 121 tcttgctttttttctttgttttttcataacttttattattaatcagtttaataatgaggt 180
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tcttgc-ttttttctttgttttttcataacttttattattaatcagtttaataatgaggt 487

                                                                       
Query: 181 atcatcatatctcacacaatccaaccacagtgaatctcttgcttcctgtcaaaatcgtag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 atcatcatatctcacacaatccaaccacagtgaatctcttgcttcctgtcaaaatcgtag 427

                                                                       
Query: 241 cctcttttctattaatcattaatgttacgaaaacacacatatatatgtgtgtattctcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cctcttttctattaatcattaatgttacgaaaacacacatatatatgtgtgtattctcat 367

                                                                       
Query: 301 gcctatacacatgtaggaaagaagaggatatataaatagtcatctacagaaacgaataaa 360
           ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 366 gcctatacacacgtaggaaagaagaggatatataaatagtcatctacagaaatgaataaa 307

                                                                       
Query: 361 tacataaatacaacctgctgagtcagtttctaattcagtttcacagtaataaaccatgag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tacataaatacaacctgctgagtcagtttctaattcagtttcacagtaataaaccatgag 247

                                                                       
Query: 421 aaacaaagaaattctataattccacactcaggcaagtattaggcaatgctttatttatat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aaacaaagaaattctataattccacactcaggcaagtattaggcaatgctttatttatat 187

                                                                       
Query: 481 taatttgattataacattttagaaaataattttgtatgtattaattcaactagctcaatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 taatttgattataacattttagaaaataattttgtatgtattaattcaactagctcaatt 127

                                                                       
Query: 541 tatatgaaatcattacaatattatttataattgctgcaggcattttcagtgaatttcttt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tatatgaaatcattacaatattatttataattgctgcaggcattttcagtgaatttcttt 67

                                                                       
Query: 601 actttgtttctctagttaaatatgtatttgcatatataagtagcttctgtttatatccaa 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  actttgtttctctagttaaatatgtatttgcatatataagtagcttctgtttatatccaa 7

                 
Query: 661 atactt 666
           ||||||
Sbjct: 6   atactt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1068
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1058
Effective search space:   697222
Effective search space used:   697222
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)