Query= MSMg01no494_k05.b1 MSMg01no494_k05.b1 CHROMAT_FILE:
MSMg01no494_k05.b1 PHD_FILE: MSMg01no494_k05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:31 2005
(514 letters)
>mm_chr14_62294024_62294938
Length = 915
Score = 919 bits (475), Expect = 0.0
Identities = 505/515 (98%), Gaps = 1/515 (0%)
Strand = Plus / Plus
Query: 1 gaacagatactacaaacattccaaattgtattttttt-aacccatagaaagatttcttta 59
|||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||
Sbjct: 201 gaacagatactacaaacacgccaatttgtattttttttaacccatagaaagatttcttta 260
Query: 60 ccatagaaaggtaaagaaaaataacacaaagagtttgaattattctatttaatggacagt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 ccatagaaaggtaaagaaaaataacacaaagagtttgaattattctatttaatgaacagt 320
Query: 120 taggccatacacttgacttgttgcttttagcttaagtgtggtttgaataggaactgtccc 179
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 321 taggccatacacttgacttgttgcttttagcttaagtgtggtttaaataggaactgcccc 380
Query: 180 caaaggcttatatatttgaatgattagttcccagttcttggaactttttgggaaggattg 239
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 caaaggcttatatatttgaatgattggttcccagttcttggaactttttgggaaggattg 440
Query: 240 gaaggtatggccttgttggaggaggtgtgtctctgggggtggtttgaggttccaaaagcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaggtatggccttgttggaggaggtgtgtctctgggggtggtttgaggttccaaaagcc 500
Query: 300 caagctatccccagtgtgtccatgtgtctgtcagtctctcatcctccctcctccgtgtct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagctatccccagtgtgtccatgtgtctgtcagtctctcatcctccctcctccgtgtct 560
Query: 360 cccgattgtgtctcaataatgagttctctgttactgctctagcaccatgcctgattgcct 419
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 561 cccgattgtgtctcaataatgagttctctgttactactccagcaccatgcctgattgcct 620
Query: 420 gctgccatgctccctgccatgacgaccatggagcctaactcttagaaattgtaagtcaca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctgccatgctccctgccatgacgaccatggagcctaactcttagaaattgtaagtcaca 680
Query: 480 aataaggattttgccttggtcacagagccttaaca 514
|||||||||||||||||||||||||||||||||||
Sbjct: 681 aataaggattttgccttggtcacagagccttaaca 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 915
Length adjustment: 10
Effective length of query: 504
Effective length of database: 905
Effective search space: 456120
Effective search space used: 456120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_k05.g1 MSMg01no494_k05.g1 CHROMAT_FILE:
MSMg01no494_k05.g1 PHD_FILE: MSMg01no494_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:31 2005
(446 letters)
>mm_chr14_62452658_62453503
Length = 846
Score = 845 bits (437), Expect = 0.0
Identities = 443/445 (99%)
Strand = Plus / Minus
Query: 1 ctctgccttctggccagcataagcctgcactgtacattcaggaagtgcgaacccgccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ctctgccttctggccagcataagcctgcactgtacattcaggaagtgcgaacccgccaaa 586
Query: 61 gtcggagactagcagtctgacactgtgggtggagaggaccactgtgagacagtatgactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gtcggagactagcagtctgacactgtgggtggagaggaccactgtgagacagtatgactc 526
Query: 121 tggggtagcactttttaggagttattgaaaatgccatggcaggtgtcaaccaaacccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tggggtagcactttttaggagttattgaaaatgccatggcaggtgtcaaccaaacccaca 466
Query: 181 ggctgaaagttagttcattcccaccgtctttcaacagaggtctcctgcctctcagaaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ggctgaaagttagttcattcccaccgtctttcaacagaggtctcctgcctctcagaaggg 406
Query: 241 atagcaacagcacggacactcgagacgccaaaatcgctctctccaaatgattaaccaccc 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 405 atagcaacagcacggacactcgagacgccaaaaccgctctctccaaatgattaaccaccc 346
Query: 301 acattcctcagtgattcttgtttttggcaacttttgcctctgtgattatttctctcacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 acattcctcagtgattcttgtttttggcaacttttgcctctgtgattatttctctcacct 286
Query: 361 ggaaatcccactgctgtgtggaaaaggagaaacacgttctgctggctaatcctcatggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ggaaatcccactgctgtgtggaaaaggagaaacacgttctgctggctaatcctcatggct 226
Query: 421 tccttcacccctggagatctcaata 445
||||||| |||||||||||||||||
Sbjct: 225 tccttcatccctggagatctcaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
