Query= MSMg01no495_e20.b1 MSMg01no495_e20.b1 CHROMAT_FILE:
MSMg01no495_e20.b1 PHD_FILE: MSMg01no495_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:21 2005
(500 letters)
>mm_chr14_109256956_109257855
Length = 900
Score = 893 bits (462), Expect = 0.0
Identities = 462/462 (100%)
Strand = Plus / Minus
Query: 39 gtgaggacacttcaatcacacttgggagggagaagaaaacaatcacaggatttgggcggg 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 gtgaggacacttcaatcacacttgggagggagaagaaaacaatcacaggatttgggcggg 841
Query: 99 agggaggaaggtacctgagtgggaaaggtgacagggaggggaagaggtataatgaggtat 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 agggaggaaggtacctgagtgggaaaggtgacagggaggggaagaggtataatgaggtat 781
Query: 159 tgctgggcctggtggggctggtgggacaagactgaagccctgggagccagcagaaagaat 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tgctgggcctggtggggctggtgggacaagactgaagccctgggagccagcagaaagaat 721
Query: 219 caaaacaggcaacctcaagatattgtatttgtttgtttgcctactctatctttgttccaa 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 caaaacaggcaacctcaagatattgtatttgtttgtttgcctactctatctttgttccaa 661
Query: 279 aggcacatggtaagttttatgggtttatactttaacctacggcttgtcagtaacagtacc 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aggcacatggtaagttttatgggtttatactttaacctacggcttgtcagtaacagtacc 601
Query: 339 ataattaagaagctgaagttacaatgtgtaatcctaaacatattttgtatgtgcctgttt 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ataattaagaagctgaagttacaatgtgtaatcctaaacatattttgtatgtgcctgttt 541
Query: 399 aaaggaaattcatttgcttctctatgaatgcaatagaactattttttgcacagaaataac 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aaaggaaattcatttgcttctctatgaatgcaatagaactattttttgcacagaaataac 481
Query: 459 acaatgagttttgaaaaaaaatggatgagataaaattgtaca 500
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 acaatgagttttgaaaaaaaatggatgagataaaattgtaca 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_e20.g1 MSMg01no495_e20.g1 CHROMAT_FILE:
MSMg01no495_e20.g1 PHD_FILE: MSMg01no495_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:21 2005
(612 letters)
>mm_chr14_109134525_109135538
Length = 1014
Score = 1104 bits (571), Expect = 0.0
Identities = 604/615 (98%), Gaps = 4/615 (0%)
Strand = Plus / Plus
Query: 1 cattttggcaggtgatggtttgcatggtggctttgtgcaatcaactaaggcaaagcagcc 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 cattttggcaggtgatggtttgcatggtggctttgtgcaattaactaaggcaaagcagca 260
Query: 61 tttttt-gtatgctctgacagcaaaatttgtcatctaaacccaccaatttagaagtcaac 119
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttttgaatgctctgacagcaaaatttgtcatctaaacccaccaatttagaagtcaac 320
Query: 120 ttctgtagctctctctatggtatagaacttccaaattttacatcagtgaggtaaagaaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctgtagctctctctatggtatagaacttccaaattttacatcagtgaggtaaagaaaa 380
Query: 180 gtaaaaggagactcatatataaagtcagtcacaatattt-atagggaaatttcc-tataa 237
|||||||||||||||||||||| ||||||||||| |||| |||||||| ||||| |||||
Sbjct: 381 gtaaaaggagactcatatataaggtcagtcacaa-attttatagggaattttccctataa 439
Query: 238 gaccagaggatactcatttctatttccaatgcataggcaaggtgacttggaaaggaaaca 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaccagaggatactcatttctatttccaatgcataggcaaggtgacttggaaaggaaaca 499
Query: 298 tgaagcctgtcattgggcttattgccttctagaataaaatccagtctttcaaaaggagat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgaagcctgtcattgggcttattgccttctagaataaaatccagtctttcaaaaggagat 559
Query: 358 gaaggaaaaagagttggtgtgggtatctgataaactgctggaaacatgtgttctttctcc 417
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 560 gaaggaaaaagagttggtgtgggtatctgataaactgctggaaacatgtattctttctcc 619
Query: 418 tgagcttaagattataattgccaaagtgaattggacacattgacaatgttcagttcccta 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgagcttaagattataattgccaaagtgaattggacacattgacaatgttcagttcccta 679
Query: 478 ctacagagctggatatgggatcatctcactgggcaaaagtgtttgctttgtaagcaagct 537
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 680 ctacagagctggatatgggatcatctcactggacaaaagtgtttgctttgtaagcaagct 739
Query: 538 gacctgagtttcaatccctgatagccatgtaaaaaacaaggcctgatgaatttgaaatca 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gacctgagtttcaatccctgatagccatgtaaaaaacaaggcctgatgaatttgaaatca 799
Query: 598 atcaagatgaattac 612
|||||||||||||||
Sbjct: 800 atcaagatgaattac 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1014
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1004
Effective search space: 604408
Effective search space used: 604408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
