This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
Click to search
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Search Result
BAC
Clone Name
MSMg01-495E20
Chromosome
14 (Build37)
Map Location
109,134,725 - 109,257,855
singlet/doublet
doublet
Overlap gene
none
Upstream gene
LOC668752
,
EG668754
,
LOC668757
,
EG668761
Downstream gene
Slitrk1
,
LOC640892
Link
Open Mouse BAC browser
Click to get alignment info.
name
LOC668752
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:668752
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins
pseudo
: _no_value
name
EG668754
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:668754
MGI:3643226
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
pseudo
: _no_value
name
LOC668757
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:668757
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins
pseudo
: _no_value
name
EG668761
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:668761
MGI:3645381
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 61 ESTs, 8 Proteins
name
Slitrk1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:76965
MGI:2679446
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC640892
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:640892
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins
pseudo
: _no_value
name
EG668761
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:149265862
GeneID:668761
MGI:3645381
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 61 ESTs, 8 Proteins
product
: predicted gene, EG668761
transcript_id
: XM_001003482.2
name
Slitrk1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:51371940
GeneID:76965
MGI:2679446
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: SLIT and NTRK-like family, member 1
transcript_id
: NM_199065.1
name
EG668761
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:149265863
GeneID:668761
MGI:3645381
definition
codon_start
: 1
product
: similar to ribosomal protein L27a-like
protein_id
: XP_001003482.2
name
Slitrk1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:51371941
CCDS:CCDS27325.1
GeneID:76965
MGI:2679446
definition
GO_component
: GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]
GO_function
: GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA]
GO_process
: GO:0007409 - axonogenesis [Evidence IDA]
codon_start
: 1
note
: slit and trk like gene 1
product
: SLIT and NTRK-like family, member 1
protein_id
: NP_951020.1
name
LOC668752
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668752
definition
number
: 1
pseudo
: _no_value
name
EG668754
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668754
definition
number
: 1
pseudo
: _no_value
name
EG668754
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668754
definition
number
: 2
pseudo
: _no_value
name
LOC668757
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668757
definition
number
: 1
pseudo
: _no_value
name
LOC640892
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:640892
definition
number
: 1
pseudo
: _no_value
clone name
MSMg01-390O20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-407I24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-544K13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-319L14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-415E14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-304B08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-484E09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-341P13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-108F12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-279L23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-353M06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-471B03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-418D22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-527D03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-232D06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-139P05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-464O23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-204A07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-142P03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-322I18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-321G14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-476M17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-113I03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-417K23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-299I24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-455D02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-292H20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-344A12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-293G02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-054O20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-268F05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-399N06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-454I21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-517D17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-275F15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-057E05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-422O18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-118D20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-319M11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-451H16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-193C11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-317B07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-488N04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-075F12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-080F21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-308I21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-495E20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-467G15
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-093G12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-382J08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-312A24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-154N05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-357H19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-080N11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-386C11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-412N16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-414D14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-452L04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-371E03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-490A10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-199E03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-382N15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-495F04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-491D02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-112E20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-313A10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-105H08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-360L13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-147I15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-508C22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-196N11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-088D22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-323C18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-096I08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-071F14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-480N13
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-165G19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-409N06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-134D17
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-377B03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-548F07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-344A03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-377K10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-502E10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-080P14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-113M08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-342H03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-276A01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-139A03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-196D14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-341O06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-081A02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-300K15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-102H23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-480N03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-350L03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-377E16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-547N23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-324F23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-086M09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-213D22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-280E05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-146K03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-280E18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-392J11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-168O22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-168N24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-400P08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-332G02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-349M19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-279P17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-143M14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-516M24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-432H11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-127K11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-547E02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-100B01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-120A07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-139K04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-161L22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-031I03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-171N18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-186H10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-274A20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-077K04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-106E07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-100I16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-152G14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-200D20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-017C05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-102O18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-111E08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-226C24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-288J17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-145E24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-107M10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-021A14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-185G09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-346N22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-150K22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-202B15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-047C04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-080M10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-284B12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-233M20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-288F20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-142P13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-299L18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-284C05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-245D02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-343O12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-328N14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-116A19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-118A01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-167P03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-076P08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-315C01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-338O22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-261D17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-332H04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-179K16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-048C09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-012G16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-022J09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-146G12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-279H03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-065B04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-011A19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-104C10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-054B14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-108I16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-317E24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-273L15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-225I22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-173I09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-058I18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-282O09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-198G08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-269D07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-078A06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-292A12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-185D22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-340J21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-342A23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-320P18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-009O04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-015F11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-340B24
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