Query= MSMg01no495_n05.b1 MSMg01no495_n05.b1 CHROMAT_FILE:
MSMg01no495_n05.b1 PHD_FILE: MSMg01no495_n05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:58 2005
(239 letters)
>mm_chr14_120736779_120737420
Length = 642
Score = 437 bits (226), Expect = e-127
Identities = 237/242 (97%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 1 tcactggaatgcgaagccatgaacagagaaacttgacttcctggagcacttcagacaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcactggaatgcgaagccatgaacagagaaacttgacttcctggagcacttcagacaggt 260
Query: 61 gtattcatttccgtgttctgcaagcaaccatttagtccccagcagagctaagagctgaat 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 gtattcatttccgtgttctgcaagcaaccatttagtccccagcagagccaagagctgaat 320
Query: 121 cgggttcctgaacaaaaagctagggcttctcacagagtttgcagttgttctggagaaaca 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgggttcctgaacaaaaagctggggcttctcacagagtttgcagttgttctggagaaaca 380
Query: 181 atgacagggcagcca---actcaagatcagaacaggttgaagtagacaccaggccagaag 237
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgacagggcagccaccaactcaagatcagaacaggttgaagtagacaccaggccagaag 440
Query: 238 ag 239
||
Sbjct: 441 ag 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 642
Length adjustment: 9
Effective length of query: 230
Effective length of database: 633
Effective search space: 145590
Effective search space used: 145590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no495_n05.g1 MSMg01no495_n05.g1 CHROMAT_FILE:
MSMg01no495_n05.g1 PHD_FILE: MSMg01no495_n05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:58 2005
(241 letters)
>mm_chr14_120868645_120869285
Length = 641
Score = 445 bits (230), Expect = e-129
Identities = 239/242 (98%), Gaps = 2/242 (0%)
Strand = Plus / Minus
Query: 1 ttcccaggacctgaagggcagaatagaaca-gattcccacaggctgtcctttgactctca 59
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 441 ttcccaggacctgaagggcagaatagaa-aggattcccacaggctgtcctttgactctca 383
Query: 60 cacaagcttcatggtattccataccatggacaaataaaaatgaacaaattttaaaaagta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cacaagcttcatggtattccataccatggacaaataaaaatgaacaaattttaaaaagta 323
Query: 120 gtgtatattaaaatttaaaaacctggtggtagcttttaactgctgtgtgttgagtcaccc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtgtatattaaaatttaaaaacctggtggtagcttttaactgctgtgtgttgagtcaccc 263
Query: 180 caccttgacatttgcccccttctggggagtagccgcagaagctgccagactcgcagaaga 239
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 262 caccttgacatttgcccccttctagggagtagccgcagaagctgccagactcgcagaaga 203
Query: 240 at 241
||
Sbjct: 202 at 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
