NCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATTGCATTTCTCTTTGGATGCACGGCTTCCCCTCTGGGAACGG
CCTGGGTGGCCAATACGTGATCAAGCACTGTGGCATCTCTGTGGTACCTT
GCATGTAAGAAGATAGCCATGAAGAGTAGTGAATTCAAAGTTGGTATTCA
AAAGTCGGTCACCAGGGGGCAGGAGAGAGTAAAATTTCATAGTATGGCTT
TTGAATTTGAGACTCTGATGAGAGTTTAGAAGAAGCCAAGATTAAACACA
AAGACCTCCAGATAAAAATCTGGTTAAAAACCAACATATCTGAGCCTCCT
TTAGTCCAGGCATTGAAGACTCTTTTTTTTTAAATGGAAACGGGTCGTGC
AGACGGGCTAACATTGATCTTTATCAATCATTAACCGCCTCCCACACCTG
CAGAGAAGCAATTCTGCAACTGAGTTACCAGAGGATAGGAAGATGAGGGC
TCCAGCTCCTCTCCCATCCACATCATCCCTCCTCGTCCCCATTGCAGATC
TACAAATATGGAACATCTGCATCATCCGCCTGCAGGGCTCTAGCCTCCAC
AGAGACCTGCCCTCCCACACTTCTGCATCTGCTTCTCTTCAAACCCCCTC
CTCCCCACGGAGCCCCCCTCATAATCTATCAGCTTCTGGTCCTCTGCTTT
AGNCACGCCTCTCCCTCACTCCTATACCGCACTGCAACCCTCCACAGAAA
TGGGATCTGTGTTAGTCTGAAG

NACTATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXATTTCTGCGGTAATTCAAGAGAAACCCTGTCTCAAAAAG
AAAAAGGAAGGAAGGGAGTGTAGGGAGGGAGGGAGGGAGGAANNNNNNNN
NNNNNNNNNCNTNCNNNNTTNNCNGNNNGACNNNNNTNNNNNNCCNCNCC
CCTCTTTTTTTTCTTCCCTTTCTCTTCTTTTTCTTTCTTTTTTTCTCTTT
TTTTTTTTTTTCCCCTTTTTCTTCTCCCCTTTTCTTTTCATCTTTTCCTT
GCTCACCCCCCCCCTCCTTTTTCCTCCTTTTCCAACACCCCTCCTCCGCC
TCCTTTTTTCTTTTTTTTTCTTCCCTCTCCCATTTTTTCTCTCCCCTCTC
TTTCTTTTCTTTTTCTTTTCCCCCCCCCTTTCCCCTTTTTTCTTTTTTTT
TTTTTCTTTCTCTCCTCTTTTCTTCTTTCTTTTTTCTTCTTCTCTTCTTT
TTTTTTTTTTTCTCTCTTTTCTCTTTTCTTTTCCTCTTTTCTCCTTTTTT
TTTCTCTTTCCCTTTTCTCTTCTCCTTTTTCTTCTTTTTTTTTTTTCCTT
TCTTTTTTTCTTTTCTTTTTTTTTCTTTCTCCTCTTTTCTTTTCCTCTCT
TTTTTTTTTTTCCCCTCCCTTCTTCTTCCCTTTTTTTCTTCTCTCTTCCT
CTTCTTTCCCTCTTTTTTCCCTTTCTCCCTCTCTCTTTTTCGTTTTTTTT
TTTTTTTTCTTTTTTCTTGCTTCTTTTCCTCCTCTCTTTCCTTTCTTCTT
TTTTCCCTTTTTTCCTTTTTCCCTC

Query= MSMg01no497_m18.b1 MSMg01no497_m18.b1 CHROMAT_FILE:
MSMg01no497_m18.b1 PHD_FILE: MSMg01no497_m18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:36 2005
         (677 letters)



>mm_chr14_27996244_27997324
          Length = 1081

 Score = 1218 bits (630), Expect = 0.0
 Identities = 662/677 (97%), Gaps = 10/677 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattg---catttctctttggatgcacggcttcccctctgggaacggcctgggtg 61
           ||||||||||   |||   |||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 gaattcattgcaacat---tctttggatgcacggcttcccctctgggaacggcctgggtg 838

                                                                       
Query: 62  gccaatacgtgatcaagcactgtggcatctctgtggtaccttgcatgtaagaagatagcc 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gccaatacgtgatcaagcactgtggcatctctgtggtaccttgcatgtaagaagatagcc 778

                                                                       
Query: 122 atgaagagtagtgaattcaaagttggtattcaaaagtcggtcaccagggggcaggagaga 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 atgaagagtagtgaattcaaagttggtattcaaaagtcggtcaccagggggcaggagaga 718

                                                                       
Query: 182 gtaaaatttcatagtatggcttttgaatttgagactctgatgagagtttagaagaagcca 241
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gtaaaatttcatagcatggcttttgaatttgagactctgatgagagtttagaagaagcca 658

                                                                       
Query: 242 agattaaacacaaagacctccagataaaaatctggttaaaaaccaacatatctgagcctc 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 agattaaacacaaagacctccagataaaaatctggttaaaaaccaacatatctgagcctc 598

                                                                       
Query: 302 ctttagtccaggcattgaagactc---tttttttttaaatggaaacgggtcgtgcagacg 358
           ||||||||||||||||||||||||   ||||||||| |||||||||||||| ||||||||
Sbjct: 597 ctttagtccaggcattgaagactctttttttttttttaatggaaacgggtcatgcagacg 538

                                                                       
Query: 359 ggctaacattgatctttatcaatcattaaccgcctcccacacctgcagagaagcaattct 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ggctaacattgatctttatcaatcattaaccgcctcccacacctgcagagaagcaattct 478

                                                                       
Query: 419 gcaactgagttaccagaggataggaagatgagggctccagctcctctcccatccacatca 478
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 477 gcaactgagttaccagaggataggaagatgagggctccagctcctctcccattcacatca 418

                                                                       
Query: 479 tccctcctcgtcccca-ttgcagatctacaaatatggaacatctgcatcatccgcctgca 537
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tccctcctcgtccccagttgcagatctacaaatatggaacatctgcatcatccgcctgca 358

                                                                       
Query: 538 gggctctagcctccacagagacctgccctcccacacttctgcatctgcttctcttcaaac 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gggctctagcctccacagagacctgccctcccacacttctgcatctgcttctcttcaaac 298

                                                                       
Query: 598 cccctcctccccacggagcccccctcataatctatcagcttctggtcctctgctttagnc 657
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 297 cccctcctccccacggagcccccctcataatctatcagcttctggtcctctgctttagcc 238

                            
Query: 658 acgcctctccctcactc 674
           |||||||||||||||||
Sbjct: 237 acgcctctccctcactc 221


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1081
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1071
Effective search space:   714357
Effective search space used:   714357
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)