Query= MSMg01no500_b23.b1 MSMg01no500_b23.b1 CHROMAT_FILE:
MSMg01no500_b23.b1 PHD_FILE: MSMg01no500_b23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:42 2005
(587 letters)
>mm_chr14_80016549_80017533
Length = 985
Score = 1100 bits (569), Expect = 0.0
Identities = 582/587 (99%), Gaps = 2/587 (0%)
Strand = Plus / Plus
Query: 1 catgtttatgaaattcatgttagcaatttcacaataaaatcccaggatagaatagtttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtttatgaaattcatgttagcaatttcacaataaaatcccaggatagaatagtttga 260
Query: 61 tactcctatgccaaggtctggcaggaggaatatagtaaagtcttagttttctgtaattaa 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tactcctatgccaaggtttggcaggaggaatatagtaaagtcttagttttctgtaattaa 320
Query: 121 gccacgcttttggttttgacttttttttttaaagatcacaaaaggtgtgtccagcaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccacgcttttggttttgacttttttttttaaagatcacaaaaggtgtgtccagcaaaat 380
Query: 181 gactgcagtttattaacatacaccagtttttgaatcccagccaaggggtttcaggcagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gactgcagtttattaacatacaccagtttttgaatcccagccaaggggtttcaggcagca 440
Query: 241 ttcagttaatgttgcagcatggtagcgtgttgagagagcacgcacagggcagagagtgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcagttaatgttgcagcatggtagcgtgttgagagagcacgcacagggcagagagtgca 500
Query: 301 tgctgtgtgttcaggctaaggctgccgtgatgctgttcagtgcggtattggctagggctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgctgtgtgttcaggctaaggctgccgtgatgctgttcagtgcggtattggctagggctg 560
Query: 361 cccaaatgccagggctccttacacatttgccttagaattagcttgtggtggtgttactgt 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 cccaaatgccagggctccttacacatttggcttagaattagcttgtggtggtgttactgt 620
Query: 421 tgccaaagctttggtggttcctggattcagctgcaaagctggatacagggtcgagagacc 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 tgccaaagctttggtggttcctggattcagctgcacagctggatacagggtcgagagacc 680
Query: 481 tacagataggagaccagtgttctgaccctcgggtcaacatatcttccatatgtaatcata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tacagataggagaccagtgttctgaccctcgggtcaacatatcttccatatgtaatcata 740
Query: 541 aactgctgtgtttttcaaaaacaaattgaaaaattttttttttttgt 587
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 741 aactgctgtgtttttcaaaaacaaattgaaa--ttttttttttttgt 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 985
Length adjustment: 10
Effective length of query: 577
Effective length of database: 975
Effective search space: 562575
Effective search space used: 562575
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no500_b23.g1 MSMg01no500_b23.g1 CHROMAT_FILE:
MSMg01no500_b23.g1 PHD_FILE: MSMg01no500_b23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:42 2005
(610 letters)
>mm_chr14_80153483_80154492
Length = 1010
Score = 1164 bits (602), Expect = 0.0
Identities = 608/610 (99%)
Strand = Plus / Minus
Query: 1 ttaagacattggtggaggaggcaggaaggaggtagaggagaaagaagggaggaggaaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 ttaagacattggtggaggaggcaggaaggaggtagaggagaaagaagggaggaggaaggg 824
Query: 61 agagagatggggaaatgcaaaaaaggtccagaaaattcctgtttgcctttcaaagagtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 agagagatggggaaatgcaaaaaaggtccagaaaattcctgtttgcctttcaaagagtcc 764
Query: 121 tgtaagtgattggtctgtgagatgcaggaatggaggcttagcgactccactgcttcctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tgtaagtgattggtctgtgagatgcaggaatggaggcttagcgactccactgcttcctat 704
Query: 181 ggggcatctgtccagtggctgccttgcttttgtttgctgattgggcagctggggcacgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ggggcatctgtccagtggctgccttgcttttgtttgctgattgggcagctggggcacgga 644
Query: 241 gagcccagccactggcaggagagattatcctccctctgccctttcttgcacagggctctg 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gagccgagccactggcaggagagattatcctccctctgccctttcttgcacagggctctg 584
Query: 301 ccattcttcaaagcaaatgtgaaatgaatatttaaagaatatagacttaggggacctaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ccattcttcaaagcaaatgtgaaatgaatatttaaagaatatagacttaggggacctaaa 524
Query: 361 tcttatttgcaatgctttatttcttttatttgaatagatctacaataaatatgacaaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tcttatttgcaatgctttatttcttttatttgaatagatctacaataaatatgacaaaac 464
Query: 421 attaacatttgtcagttctggttggccagacaacacaagtgcttgttatgtatgtatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 attaacatttgtcagttctggttggccagacaacacaagtgcttgttatgtatgtatttt 404
Query: 481 ttaatttttcaactataacgaacgattacagctccggcaagatcactccattcctcagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttaatttttcaactataacgaacgattacagctccggcaagatcactccattcctcagct 344
Query: 541 tccccctgccaagccccggctccctaagatctttattctgtgatggtagccacgctctct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 343 tccccctgccaagccccggctccctaagatctttattctgtgatggtagccacactctct 284
Query: 601 tcctcccact 610
||||||||||
Sbjct: 283 tcctcccact 274
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
