Query= MSMg01no501_e06.b1 MSMg01no501_e06.b1 CHROMAT_FILE:
MSMg01no501_e06.b1 PHD_FILE: MSMg01no501_e06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:04 2005
(610 letters)
>mm_chr14_76517465_76518474
Length = 1010
Score = 1081 bits (559), Expect = 0.0
Identities = 584/593 (98%), Gaps = 3/593 (0%)
Strand = Plus / Plus
Query: 20 atgtgaaatggctttccatccatagctctgatggttgcagtgagcccttctggtcttcgc 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 atgtgaaatggctttccatccatagctctgatggttgcagtgagcccttctggtcttcgc 279
Query: 80 acgagccccatcaacatctgagctccactgttccatttttcttccctgacctgctttcta 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 acgagccccatcaacatctgagctccactgttccatttttcttccctgacctgctttcta 339
Query: 140 agctctgttcagaaagccacacaattgtgatatactctgcaggtgaactggtggtgctcg 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 agctctgttcagaaagccacacaattgtgatatactctgcaggtgaactggtggtgctcg 399
Query: 200 cccacttgagggactgactagactagtgagaacctcagtgttttcttggatctcctgtgg 259
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 400 cccacttgagggactgactagactagtgagaacctcagtgttttcttggttctcctgtgg 459
Query: 260 tagaaaatgagatgttcattttgtagttgttattctgttacacaaatgacaggctgtaca 319
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 460 tagaaaatgagatgttcattttgtagttgttattctgttacacaaatgaccggctgtaca 519
Query: 320 attgcaacatttgccaagcacattttctcttagctaaagtgttgaaactcttagaatact 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 attgcaacatttgccaagcacattttctcttagctaaagtgttgaaactcttagaatact 579
Query: 380 ggtaatcatgattctaaatgtgggctgtccttcaggtaaaacatttctacattatttcaa 439
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ggtaatcacgattctaaatgtgggctgtccttcaggtaaaacatttctacattatttcaa 639
Query: 440 agattttggtatcgggtagactttttgtctatgtcacatggccttttagaccgtttgatg 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 agattttggtatcgggtagactttttgtctatgtcacatggccttttagaccgtttgatg 699
Query: 500 acttttgtgggtttggtttttgttgttcttgttggtttt--tttattttattttattttg 557
|||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||
Sbjct: 700 acttttgtgggtttggtttttgttgttcttgttgtttttattttattttattt-attttg 758
Query: 558 caattttttctttctggttttctattttaaggcagactcttactaaatatact 610
|||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 759 caattttttctttctgtttttctatcttaaggcagactcttactaaatatact 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_e06.g1 MSMg01no501_e06.g1 CHROMAT_FILE:
MSMg01no501_e06.g1 PHD_FILE: MSMg01no501_e06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:04 2005
(408 letters)
>mm_chr14_76685480_76686287
Length = 808
Score = 603 bits (312), Expect = e-177
Identities = 339/348 (97%)
Strand = Plus / Minus
Query: 1 ctccggttgtataaggaagcatttaataaatgttggtggtgttggtattaattagactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ctccggttgtataaggaagcatttaataaatgttggtggtgttggtattaattagactca 289
Query: 61 tgcttgccaaatttacttttgaaaactcccaagaacaactggagaagattgaaattctgc 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 288 tgcttgccaaatttacttttgaaaacttccaagaacaactggagaagattgaaattctgc 229
Query: 121 tggggacattataatcattgctgttttgttttgtttttaaaacagggtttctctgtgtag 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tggggatattataatcattgctgttttgttttgtttttaaaacagggtttctctgtgtag 169
Query: 181 ccttggctattgctgaaactcagtttgtagaccaggctggccttgaactcaaaaatccac 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ccttggctattgctgaaattcagtttgtagaccaggctggccttgaactcaaaaatccac 109
Query: 241 ctgcctctttttcctgagtgccaggattaaaggtgtgcactaccatgctggggtccataa 300
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 108 ctgcctctgcctcctgagtgccaggattaaaggtgtgcacttccatgctggggtccataa 49
Query: 301 tcactgtaaaacacaaccccagccatgacatttgctttggccacttgt 348
|| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 48 tctctgtaaaacacaatcccagccatgacatttgctttggccacttgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
