Query= MSMg01no501_h22.b1 MSMg01no501_h22.b1 CHROMAT_FILE:
MSMg01no501_h22.b1 PHD_FILE: MSMg01no501_h22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:20 2005
(579 letters)
>mm_chr14_69918611_69919589
Length = 979
Score = 1038 bits (537), Expect = 0.0
Identities = 567/577 (98%)
Strand = Plus / Plus
Query: 3 gaattcactctgtatttcagggtggcctcgaactttctgtgaccctcctgcctctgcctt 62
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcactctgtaattcagggtggcctcgaactttctgtgaccctcctgcctctgcctt 262
Query: 63 ccaggtgctgaaattataaatgtgagcctctcgcacctggtcaatattctcacctctgtc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ccaggtgctgaaattataaatgtgagcctctcgcacctggtcaatattctcacctctgtc 322
Query: 123 ataaactctgaggctgataagattcttatattgctgtcattagtcatatctcagatatgt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ataaactctgaggctgataagattcttatattgctgtcattagtcatatctcagatatgt 382
Query: 183 gctctagaaaaatctgtagtcacctattcccaactccagccaaatacacagcacattaga 242
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 383 gctctagaaaaatctgtagtcacctattcctaactccagccaagtacacagcacattaga 442
Query: 243 gtgcagtcatgttggctgacatcccccagatggtttactctaaggttccacatcacaaat 302
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 443 gtgcagtcatgttggctgacatcccccagatggtttacacaaaggttccacatcacaaat 502
Query: 303 aaggccatcagtagttacagtcttccaggcagcataggtaccccatttccagtgtctcag 362
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aaggccatcagtagttacaatcttccaggcagcataggtaccccatttccagtgtctcag 562
Query: 363 acagacaactgagcacagaaggggtagactttaggagaatggagacagagtggcagaaag 422
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 563 acagacaactgagcacagaaaaggtagactttaggagaatggagacagagtggcagaaag 622
Query: 423 ctcagaagcacacggtgtgaaggtaatactgggcttaagtaaagagacacctctacttcc 482
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 623 ctcagaagcacacggtgtggaggtaatactgggcttaagtaaagagacacctatacttcc 682
Query: 483 ttgtgaggagctgtctcctggttatcggagataccaaaccctacagctgttcctgtggct 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttgtgaggagctgtctcctggttatcggagataccaaaccctacagctgttcctgtggct 742
Query: 543 ttcacactggtatcctctgttaatagcatctatttat 579
|||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttcacactggtatcctctgttaatagcatctatttat 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_h22.g1 MSMg01no501_h22.g1 CHROMAT_FILE:
MSMg01no501_h22.g1 PHD_FILE: MSMg01no501_h22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:20 2005
(505 letters)
>mm_chr14_70026568_70027470
Length = 903
Score = 903 bits (467), Expect = 0.0
Identities = 495/505 (98%), Gaps = 2/505 (0%)
Strand = Plus / Minus
Query: 1 aagttcaagaccatgctcaactgcacagcaagtctgcggccagcctaggctatagaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 aagttcaagaccatgctcaactgcacagcaagtctgcggccagcctaggctatagaagac 717
Query: 61 actctcaaaacaagcaagcaacaacaagcataaaagggaggttgttttggatcctgactc 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 716 actctcaaaacaagcaagcaacagcaagcataaaagggaggttgttttggatcctgactc 657
Query: 121 tgctggttcaattcaaagtcaactagcatcgatcttctgctgtcagaggtcaaaggttaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 656 tgctggttcaattcaaagtcaactagcatcgatcttctgctgtcagaggtcagaggttaa 597
Query: 181 cactggccctcacgtggcaaaggacacagagcatacatgtgtctcctcttatctcgtgct 240
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 596 cactggcccacacgtggcaaaggacacagagcatacatgtgtctcctcttgtctcgtgct 537
Query: 241 ttcttcttatgatgtcagcaggattagattagggggctctactgtgatgacttcatctag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ttcttcttatgatgtcagcaggattagattagggggctctactgtgatgacttcatctag 477
Query: 301 ttctggtcaaatcctctgaacaccacagtcaggttctgtttctgctttctgcagtaagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ttctggtcaaatcctctgaacaccacagtcaggttctgtttctgctttctgcagtaagga 417
Query: 361 ggggacagacccttgaacacacagttctaaccatgatactagagaatccacaaacataag 420
||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 416 gggaacagacccttggacacacagttctaaccatgatactggagaatccacaaacataag 357
Query: 421 ggagagagtcacaataaaatcctgttcatctccttcagccaaagtcagttgttggtttgg 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 356 ggagagagtcacaataaaatcctgttcatctccttctgccaaagtcagttgttggtttgg 297
Query: 481 ctaactctcagagacatctttcttg 505
||||||||| ||||||||||||||
Sbjct: 296 ctaactctc--agacatctttcttg 274
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 903
Length adjustment: 10
Effective length of query: 495
Effective length of database: 893
Effective search space: 442035
Effective search space used: 442035
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
