Query= MSMg01no502_c20.b1 MSMg01no502_c20.b1 CHROMAT_FILE:
MSMg01no502_c20.b1 PHD_FILE: MSMg01no502_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:08 2005
(608 letters)
>mm_chr14_61194383_61195390
Length = 1008
Score = 1098 bits (568), Expect = 0.0
Identities = 592/600 (98%)
Strand = Plus / Plus
Query: 9 aattccgcgttttccatctaggtctttagctaaggagttgacatttgcatgtagtgtaag 68
|||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aattccgcatcttccacctaggtctttagctaaggagttgacatttgcatgtagtgtaag 268
Query: 69 gtgaagaagggttcaatgtcctgcctaatttttccaaccgcatttgttgaatgtcaaacc 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gtgaagaagggttcaatgtcctgcctaatttttccaaccgcatttgttgaatgtcaaacc 328
Query: 129 aatttaacaaaggatcaatcagtggaagagggtccatcccattgtgggtagtgctattcc 188
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 329 aatttaacaaaggatcaattagtggaagagggtccagcccattgtgggtagtgctattcc 388
Query: 189 taggctgtattctataagaaagcaggctgaacaagtcatggagaagtgagactaagcagc 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 taggctgtattctataagaaagcaggctgaacaagtcatggagaagtgagactaagcagc 448
Query: 249 atccttccatggccacgacatcagctcctgcctacagccatgcttgagttcctgtccagc 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atccttccatggccacgacatcagctcctgcctacagccatgcttgagttcctgtccagc 508
Query: 309 ttccttcaatgatgaattacaaagtagaagtgtaagccaaataaaccctttcctccccag 368
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ttccttcactgatgaattacaaagtagaagtgtaagccaaataaaccctttcctccccag 568
Query: 369 cttgcttttgatgagagtgttttgtcacagcaatagaaaccctagggcaagggacaattt 428
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 569 cttgcttttgatgagagtgttttgtcacagcaatagaaaccctagggcaagggaaaattt 628
Query: 429 cataattgatatttcctcctctcgggtgactttagcttgtgtcaaattaatataaaactc 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cataattgatatttcctcctctcgggtgactttagcttgtgtcaaattaatataaaactc 688
Query: 489 cctccacgtatgcataccctacaacaacccattattctacttaacatctgcagagagctt 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 cctccacgtatgcataccctacaacaacccattattctacttaacatctgcagagagctt 748
Query: 549 taagatgttaaaaaagaaaaacacatggaagtcttttggtttgtttggcttttgagtcag 608
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 taaggtgttaaaaaagaaaaacacatggaagtcttttggtttgtttggcttttgagtcag 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_c20.g1 MSMg01no502_c20.g1 CHROMAT_FILE:
MSMg01no502_c20.g1 PHD_FILE: MSMg01no502_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:08 2005
(537 letters)
>mm_chr14_61359479_61360414
Length = 936
Score = 1015 bits (525), Expect = 0.0
Identities = 534/537 (99%), Gaps = 1/537 (0%)
Strand = Plus / Minus
Query: 1 actgggaaagtgccagacctcacgggatggggttgcaaagtgacaaggacaaatgacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 actgggaaagtgccagacctcacgggatggggttgcaaagtgacaaggacaaatgacaag 677
Query: 61 tgacctgagctggtgctgtaaatgcttacaagaacgaggtgggacatgggacagattcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tgacctgagctggtgctgtaaatgcttacaagaacgaggtgggacatgggacagattcaa 617
Query: 121 taccacagtgagctcttgctgagtggcttccattagcccaggtacactgactcagcgccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 taccacagtgagctcttgctgagtggcttccattagcccaggtacactgactcagcgccc 557
Query: 181 caccgactaactggggtgggcgtggctaggggcagaagacttgcagcctgaagaaatggc 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 caccggctaactggggtgggcgtggctaggggcagaagacttgcagcctgaagaaatggc 497
Query: 241 tggcataaagacagctagcataaagatgacatgaggaccacaccaaccttcctgcatcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tggcataaagacagctagcataaagatgacatgaggaccacaccaaccttcctgcatcga 437
Query: 301 tcacgacacaggtgccaagtgcaagctgcaagacaggcgtgagtgtatgtcattaattcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tcacgacacaggtgccaagtgcaagctgcaagacaggcgtgagtgtatgtcattaattcc 377
Query: 361 caggttgctgtactggcttcactttctggctaaagaagcctgggcaaaggcacctgaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 caggttgctgtactggcttcactttctggctaaagaagcctgggcaaaggcacctgaccc 317
Query: 421 ctttcaagttcagccctgccaactgtaataggaacaggttttcatgtttcctatcctcaa 480
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 316 ctttcaagttc-gccctgccaactgtaataggaacaggttttcatgtttcctatactcaa 258
Query: 481 ggttattcttcctccctggcgtttcaaggccgacctgaactatactttctcttccaa 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggttattcttcctccctggcgtttcaaggccgacctgaactatactttctcttccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 936
Length adjustment: 10
Effective length of query: 527
Effective length of database: 926
Effective search space: 488002
Effective search space used: 488002
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
