Query= MSMg01no504_j01.b1 MSMg01no504_j01.b1 CHROMAT_FILE:
MSMg01no504_j01.b1 PHD_FILE: MSMg01no504_j01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:12 2005
(690 letters)
>mm_chr14_65543126_65544215
Length = 1090
Score = 1114 bits (576), Expect = 0.0
Identities = 629/660 (95%), Gaps = 21/660 (3%)
Strand = Plus / Minus
Query: 5 gaattcatatactccaagaattgggttttctccttctgtgtctctttctttctctttttg 64
|||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 660 gaattcatatactcaaagaattgggttttctccttctatgtctctttctctctctttttg 601
Query: 65 tagaaaatctgagtttttaaatattataatcatctgtggatagtttatgttttttggtta 124
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tagaaaatctgagtttttgaatattataatcatctgtggatagtttatgttttttggtta 541
Query: 125 tcatattgactaaggctttgggtatgatgctgctgaggagctgttagcgccacagactct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tcatattgactaaggctttgggtatgatgctgctgaggagctgttagcgccacagactct 481
Query: 185 gtcttgtttcagtattgagggaaagtgttcgacctttcatgattaactctgatgtcaacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gtcttgtttcagtattgagggaaagtgttcgacctttcatgattaactctgatgtcaacc 421
Query: 245 gtattagtgacaggatacctgttctgtttctagctcattctagcttttggacatgagcct 304
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gcattagtgacaggatacctgttctgtttctagctcattctagcttttggacatgagcct 361
Query: 305 catcaagtgctgtttcattactcattcctatgtagttggctgtggtggtgatttgcattg 364
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 360 catcaagtgttgtttcattactcattcctatgtagttggctgtggtggtaatttgcattg 301
Query: 365 gttgattgttagataccacatacaccttctaatggtgtaatatttgctcacgtactgcta 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 300 gttgattgttagataccacatacaccttctaatggtgtaatatttgctcacgtactccta 241
Query: 425 agaatccttttcatctctttctcttcatgaggaata---------------------ttg 463
|||||||||||||||||||||||||||||||||||| |||
Sbjct: 240 agaatccttttcatctctttctcttcatgaggaataatagcatgtgtttctcttaccttg 181
Query: 464 ttacttaattttatggcttctacattaggataatttttgacctgtgaaacagtttgggga 523
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ttacttaattttctggcttctacattaggataatttttgacctgtgaaacagtttgggga 121
Query: 524 atgttttcttctaattcagattctgaaataaattgagaaaaactgtcattgttttctctt 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atgttttcttctaattcagattctgaaataaattgagaaaaactgtcattgttttctctt 61
Query: 584 gggatggttagtcaagttggcatgaagtcattttggtgaagaattttcattgttggtata 643
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gggatggttaatcaagttggcatgaagtcattttggtgaagaattttcattgttggtata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_j01.g1 MSMg01no504_j01.g1 CHROMAT_FILE:
MSMg01no504_j01.g1 PHD_FILE: MSMg01no504_j01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:12 2005
(598 letters)
>mm_chr14_65403763_65404760
Length = 998
Score = 1141 bits (590), Expect = 0.0
Identities = 596/598 (99%)
Strand = Plus / Plus
Query: 1 agttagcagaatgtatgtgtgcgctcatgctcgctcatgtgcgtgtgtctttgcgcgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 agttagcagaatgtatgtgtgcgctcatgctcgctcatgtgcgtgtgtctttgagcgcat 260
Query: 61 gcacacacacacttatttattatttctgatttactcttcccatgttaaaatcagaattgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcacacacacacttatttattatttctgatttactcttcccatgttaaaatcagaattgt 320
Query: 121 ttcaccaaaattaagttggtaaagtaattaaagagctggattattcccatccccttagag 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 ttcaccaaaattaagttggtaaagtaattaaagagctgggttattcccatccccttagag 380
Query: 181 gctaaaggaaatcctcacaaaaagtcttccaattaaaattataagatgtgaccatattga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctaaaggaaatcctcacaaaaagtcttccaattaaaattataagatgtgaccatattga 440
Query: 241 agtgctgtttttacttacagttacaggatgctttgcctctgttttagagacatttttaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgctgtttttacttacagttacaggatgctttgcctctgttttagagacatttttaat 500
Query: 301 agatgcaatgaaaacagattctctatgactgtctacttgtgggtatcccatgcagaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agatgcaatgaaaacagattctctatgactgtctacttgtgggtatcccatgcagaatta 560
Query: 361 atttcagcttgttgctggccttggcactgcaaagctggcgatgtatagagaccttctgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttcagcttgttgctggccttggcactgcaaagctggcgatgtatagagaccttctgta 620
Query: 421 atacaaggacagctgtcaacaagtctgttttcatacctaaagccactttagagatggcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atacaaggacagctgtcaacaagtctgttttcatacctaaagccactttagagatggcat 680
Query: 481 ttgtattaagttagtaaagtagtgctgttgtcctctgaagtggttttgttgtgggatgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgtattaagttagtaaagtagtgctgttgtcctctgaagtggttttgttgtgggatgct 740
Query: 541 ttttgggacctcatgcatgccagggaagggctctacaactgaggcatattcccagcct 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttttgggacctcatgcatgccagggaagggctctacaactgaggcatattcccagcct 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
