Query= MSMg01no504_j04.b1 MSMg01no504_j04.b1 CHROMAT_FILE:
MSMg01no504_j04.b1 PHD_FILE: MSMg01no504_j04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:13 2005
(678 letters)
>mm_chr14_9733100_9734177
Length = 1078
Score = 1259 bits (651), Expect = 0.0
Identities = 668/674 (99%)
Strand = Plus / Plus
Query: 5 gaattctgtgtatactggcctcctaagcagagcacactctttttctggaaatccccatgc 64
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 205 gaattctgtgtaaaatggcctcctaagcagagcacactctttttctggaaatccccacgc 264
Query: 65 aagggttggcaaagggagaagacaacaggaagaggaaaaatacaagccctgtgcctgctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagggttggcaaagggagaagacaacaggaagaggaaaaatacaagccctgtgcctgctg 324
Query: 125 ggatgggactctcagtgccaggtgaggtgggctctatttctaaagagtgtaagtacattc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggatgggactctcagtgccaggtgaggtgggctctatttctaaagagtgtaagtacattc 384
Query: 185 ttgcttcactgcttgctttaactcacgaccacttaccttcctactgagactgatgctagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgcttcactgcttgctttaactcacgaccacttaccttcctactgagactgatgctagg 444
Query: 245 gtcaagactagagaaaactaaagatgtctctgtaacagaattacagatatagggtaggaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtcaagactagagaaaactaaagatgtctctgtaacagaattacagatatagggtaggaa 504
Query: 305 agatgaggatgaaagttggtgtaaaataagacaaaatgtctgtcctttttgtgagcacgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agatgaggatgaaagttggtgtaaaataagacaaaatgtctgtcctttttgtgagcacgg 564
Query: 365 gctaagctcattcagaaacttcacagctaacattttttgtttttcttgggttggtgattc 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 565 gctaagctcattcagaaacttcacagctaacattttttgtttttcttgggttggtgtttc 624
Query: 425 ctgtcaaggcatttggtcatggcttggtatttcttgtcacggcagctggtagatgtcttt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctgtcaaggcatttggtcatggcttggtatttcttgtcacggcagctggtagatgtcttt 684
Query: 485 tgcccactattaaaggcttaaaggatactggtggccatgtgaggatgctactggtatctg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgcccactattaaaggcttaaaggatactggtggccatgtgaggatgctactggtatctg 744
Query: 545 tagaccaaatggggcatcattgtgttgagcaaaatcagggctcttatccctgaaaagtga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tagaccaaatggggcatcattgtgttgagcaaaatcagggctcttatccctgaaaagtga 804
Query: 605 cctgngcagctggtattataacccataggacagagtcgctgtccacagaaaagctcatca 664
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 805 cctgggcagctggtattataacccagaggacagagtcgctgtccacagaaaagctcatca 864
Query: 665 ggctgaagtatcaa 678
||||||||||||||
Sbjct: 865 ggctgaagtatcaa 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_j04.g1 MSMg01no504_j04.g1 CHROMAT_FILE:
MSMg01no504_j04.g1 PHD_FILE: MSMg01no504_j04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:13 2005
(641 letters)
>mm_chr14_9911622_9912663
Length = 1042
Score = 1226 bits (634), Expect = 0.0
Identities = 640/642 (99%), Gaps = 1/642 (0%)
Strand = Plus / Minus
Query: 1 gggataaaataaggaaacattttttagctagtaaaggatactgtgtaagttattatgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gggataaaataaggaaacattttttagctagtaaaggatactgtgtaagttattatgcag 783
Query: 61 tcagctcatgaactccaaatgctagacatgagactagaattaactctgatgggtgatggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tcagctcatgaactccaaatgctagacatgagactagaattaactctgatgggtgatggc 723
Query: 121 tgagttcagaaagaagtgtgggttccctttatataatgtagatctgaaacaaaatgaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tgagttcagaaagaagtgtgggttccctttatataatgtagatctgaaacaaaatgaaac 663
Query: 181 agcaagatgttcccaagtagaacacaaaattaaagctatatacttccagatgaaatatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agcaagatgttcccaagtagaacacaaaattaaagctatatacttccagatgaaatatac 603
Query: 241 ttcattatcacgagccaaatataaaataagtagaggagaaatacagcaatatgctcccat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttcattatcacgagccaaatataaaataagtagaggagaaatacagcaatatgctcccat 543
Query: 301 aaagaataggaaggaaatttggggaactagtcctgagtaactttaaatgcctcttctatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aaagaataggaaggaaatttggggaactagtcctgagtaactttaaatgcctcttctatc 483
Query: 361 ttttactgcagagccaagaagggcagaaaattatgacaaactaattattatgatggatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttttactgcagagccaagaagggcagaaaattatgacaaactaattattatgatggatgg 423
Query: 421 ggagccagtcccttctgctcactacactgctggagcaaggagcagccctgcattctgcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggagccagtcccttctgctcactacactgctggagcaaggagcagccctgcattctgcat 363
Query: 481 ccttcaacatgtaagacactcaagataataatggtctgtacagattaacaacattatgtt 540
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccttcaacatgtaagacactccagataataatggtctgtacagattaacaacattatgtt 303
Query: 541 aaaacaggagaattaa-ttttttttcattttgtagctcctatccatgaacctggctctgt 599
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaaacaggagaattaatttttttttcattttgtagctcctatccatgaacctggctctgt 243
Query: 600 tttacatttttctatttcttgtttccaaggcactatctgtgt 641
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tttacatttttctatttcttgtttccaaggcactatctgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1042
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1032
Effective search space: 651192
Effective search space used: 651192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
