Query= MSMg01no505_b16.b1 MSMg01no505_b16.b1 CHROMAT_FILE:
MSMg01no505_b16.b1 PHD_FILE: MSMg01no505_b16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:56 2005
(599 letters)
>mm_chr14_80154181_80155179
Length = 999
Score = 1151 bits (595), Expect = 0.0
Identities = 598/599 (99%)
Strand = Plus / Plus
Query: 1 cttaaaggtgctgttagctgggggtgaccttgactatgtgagcctcctgcctccgccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaaaggtgctgttagctgggggtgaccttgactatgtgagcctcctgcctccgccacc 260
Query: 61 agcgtgttaggattgtaggaacacgctaccacactctaaggaagccagttcttgtggtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcgtgttaggattgtaggaacacgctaccacactctaaggaagccagttcttgtggtgc 320
Query: 121 tgaagatccatcccaggacttagtggatgttaggcggcctctgcccactcggctatatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaagatccatcccaggacttagtggatgttaggcggcctctgcccactcggctatatcc 380
Query: 181 ccagctgagctggcttccttgccctgcacaggcctgctaattcctctttgtcaggctcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagctgagctggcttccttgccctgcacaggcctgctaattcctctttgtcaggctcga 440
Query: 241 gccctgtgagctcatcagtcttcacacggatgacttggtcaagcaaatggcagttgtctg 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccctgtgagctcaccagtcttcacacggatgacttggtcaagcaaatggcagttgtctg 500
Query: 301 tgtgcacagcttcaggagaaaatagcacaaataaaccagatattttttttctttcccctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgcacagcttcaggagaaaatagcacaaataaaccagatattttttttctttcccctt 560
Query: 361 ctcatcgccgcagctataataaatcaggctgcctgacatttttttcccagttgcatctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcatcgccgcagctataataaatcaggctgcctgacatttttttcccagttgcatctga 620
Query: 421 gtctaatgccctcagcctagaaatctctgctatatcactgtgagtggcaagagcaatggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtctaatgccctcagcctagaaatctctgctatatcactgtgagtggcaagagcaatggg 680
Query: 481 ctcttctgattagcgaagcttaagagcagaaatgaatcatggtgcctttgtattctagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcttctgattagcgaagcttaagagcagaaatgaatcatggtgcctttgtattctagga 740
Query: 541 cataggtccgggatgagtgaatgcaggaggtcggccaaaacacagcccggtgactcaat 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cataggtccgggatgagtgaatgcaggaggtcggccaaaacacagcccggtgactcaat 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_b16.g1 MSMg01no505_b16.g1 CHROMAT_FILE:
MSMg01no505_b16.g1 PHD_FILE: MSMg01no505_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:56 2005
(599 letters)
>mm_chr14_80356580_80357579
Length = 1000
Score = 1067 bits (552), Expect = 0.0
Identities = 588/600 (98%), Gaps = 1/600 (0%)
Strand = Plus / Minus
Query: 1 actcaacctcagtctgatactttgatagcccaattcaattattttaataatacataggct 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 actcaacctcagcctgatactttgatagcccaattcaattattttaataatacataggct 741
Query: 61 cgagttttaatccgacctagttcagtcgactttttcaaaaatgaaactttgatgcc-ttt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 740 cgagttttaatccgacctagttcagtcgactttttcaaaaatgaaactttgatgcctttt 681
Query: 120 tatttttaaattagcatttgactttggttttcagttactaaattggtgtgatagattccg 179
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttttttaaattagcatttgactttggttttcagttactaaattggtgtgatagattccg 621
Query: 180 ctctggctttggagctttagttaagtgcttcgctacagtcagacacatgattgtgaagct 239
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 620 ctctggctttggagctttagttaagtgcttcactacagtcagacacatgattgtggagct 561
Query: 240 ctttatacctgtgaattgcatgctcaacaggatgatcactgccagcacatcctgcatatc 299
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 caccatacctgtgaattgcatgctcaacaggatgatcactgccagcacatcctgcatatc 501
Query: 300 atttagcccagagttagcaaactccactccccatcaaggagttataagcatgtgtctcca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atttagcccagagttagcaaactccactccccatcaaggagttataagcatgtgtctcca 441
Query: 360 ttactgtgcattaaatcatttctctccccccctactaacagttatttagaaatggaaggc 419
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttactgtgcactaaatcatttctctccccccctactaacagttatttagaaatggaaggc 381
Query: 420 ctctctgtagattactcagaagcgttctgatttatccagagaactcgtttgctttctagc 479
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 380 ctctctgtagattactcagaagcgttctgatttatccagagaactcgttcgcttcctagc 321
Query: 480 agaaaatgtaaacatcaaccattttccaaaggtggggccggcacattcatccgtggtcac 539
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 320 agaaaatgtaaacatcaaccatcttccaaaggtggggccggcacattcatccgtggtcac 261
Query: 540 taatggccacctttaatcaatgacactatcttttaaggaaagaaatgagtcaaatttgtc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 taatggccacctttaatcaatgacactatcttttaaggaaagaaatgagtcaaatttgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1000
Length adjustment: 10
Effective length of query: 589
Effective length of database: 990
Effective search space: 583110
Effective search space used: 583110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
