Query= MSMg01no506_b09.b1 MSMg01no506_b09.b1 CHROMAT_FILE:
MSMg01no506_b09.b1 PHD_FILE: MSMg01no506_b09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:09 2005
(663 letters)
>mm_chr14_26413590_26414652
Length = 1063
Score = 1195 bits (618), Expect = 0.0
Identities = 651/664 (98%), Gaps = 6/664 (0%)
Strand = Plus / Plus
Query: 4 ggaattccagaggattctc--tctcacctgtttggaatgaagagacactattgtctctgg 61
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattccagagga--cccagtctcacctgtttggaatgaagagacactattgtctctgg 259
Query: 62 caggaaacaggaattactaggagcctgcctttcaaactgcctcataattatagtcagcag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 caggaaacaggaattactaggagcctgcctttcaaactgcctcataattatagtcagcag 319
Query: 122 aaacttgctgcggaaaagaagctgaattcacccctgcaccgtaagcacctgtgtgccccc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaacttgctgcggaaaagaagctgaattcacccctgcaccgtaagcacctgtgtgccccc 379
Query: 182 agattgtctgtaccttcaaagagcacacacactgggatgagggagggacatgcttagggg 241
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 380 agattgtctgtaccttcaaagagcacacacactggggtgagggagggacgtgcttagggg 439
Query: 242 gaatacagtgtcaggagagccacattctgggaggatagagttagggggcatggcgaagct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaatacagtgtcaggagagccacattctgggaggatagagttagggggcatggcgaagct 499
Query: 302 cctgccagccatccagcgagaagcagctaacctagactaggttggaaccaaagggcaggg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cctgccagccatccagcgagaagcagctaacctagactaggttggaaccaaagggcaggg 559
Query: 362 catgagacgcttgtggaggtgaggaaagcacagccctct--gccttttcaatctagcagc 419
||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 560 catgagacgcttgtggaggtggggaaagcacagccctctctgccttttcaatctagcagc 619
Query: 420 tcgcaatggagtgctttccttctctggttgaggaaactgaagctcacaggagtaaagtcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcgcaatggagtgctttccttctctggttgaggaaactgaagctcacaggagtaaagtcc 679
Query: 480 aaggctcagggtcacatggctggagacaagctaggtcaagacaaaactaggtgaccacat 539
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 680 aaggctcagggtcacatggctggagacaggctaggtcaagacaaaactaggtgaccacat 739
Query: 540 cctccagggtatgctactctcctgttggagttgccaggggaggctccatttcctggggcc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cctccagggtatgctactctcctgttggagttgccaggggaggctccatttcctggggcc 799
Query: 600 tgaggcttccttcctgagagccctcctctctctccctccctccattccccgccctctttt 659
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 800 tgaggcttccttcctaagagccctcctctctctccctccctccattccccgccctctctt 859
Query: 660 agtc 663
||||
Sbjct: 860 agtc 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_b09.g1 MSMg01no506_b09.g1 CHROMAT_FILE:
MSMg01no506_b09.g1 PHD_FILE: MSMg01no506_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:09 2005
(551 letters)
>mm_chr14_26589164_26590114
Length = 951
Score = 1056 bits (546), Expect = 0.0
Identities = 549/550 (99%)
Strand = Plus / Minus
Query: 1 atctacagatgtgctgaggtgtcctggcttggtgactggttgggggacaaaggaccttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 atctacagatgtgctgaggtgtcctggcttggtgactggttgggggacaaaggaccttcc 691
Query: 61 tggaacagcttctatttactgaatctatttttccactcaacagctacccagtatgaatat 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tgaaacagcttctatttactgaatctatttttccactcaacagctacccagtatgaatat 631
Query: 121 aatcattcccatagtacagagaacacaggctggttggcagaggggaggtggctcatcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aatcattcccatagtacagagaacacaggctggttggcagaggggaggtggctcatcaga 571
Query: 181 agtccatttactggcattttaacaccaggctgaatggcttcagggccaaatgaggtgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 agtccatttactggcattttaacaccaggctgaatggcttcagggccaaatgaggtgaag 511
Query: 241 gtgacttgagtccccatagggcagtcagttcctctgagttggcactgagaggttggacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gtgacttgagtccccatagggcagtcagttcctctgagttggcactgagaggttggacct 451
Query: 301 ggttcttgggtcccaggatatggggcagcacacaccattctgggactgtgaggtgaatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ggttcttgggtcccaggatatggggcagcacacaccattctgggactgtgaggtgaatga 391
Query: 361 aggcctcaggatctgggaagccactggctaatgcgggctcctccaggaaaatgtgggttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aggcctcaggatctgggaagccactggctaatgcgggctcctccaggaaaatgtgggttt 331
Query: 421 ccgagatcttgtaggccagggtcctggaaccccttcaagacactagggagagctgacgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ccgagatcttgtaggccagggtcctggaaccccttcaagacactagggagagctgacgct 271
Query: 481 ggacccagggagcagaagaggagagaaaagccagcctggagtagaaacaggagaagtgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ggacccagggagcagaagaggagagaaaagccagcctggagtagaaacaggagaagtgga 211
Query: 541 agagatggga 550
||||||||||
Sbjct: 210 agagatggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
