Query= MSMg01no506_e19.b1 MSMg01no506_e19.b1 CHROMAT_FILE:
MSMg01no506_e19.b1 PHD_FILE: MSMg01no506_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:27 2005
(555 letters)
>mm_chr14_75143857_75144811
Length = 955
Score = 1004 bits (519), Expect = 0.0
Identities = 543/551 (98%)
Strand = Plus / Plus
Query: 5 gaattctaaagctattacatgccttattggcccattgagaaccagagtccaaacagaaag 64
|||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 205 gaattctaaagctaagagatgccttattggcccattgagaaccagcgtccaaacagaaag 264
Query: 65 ctgtgttggaaatgccagcatggtgaggcagaccttgcttctgtggtaatgattgagaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgtgttggaaatgccagcatggtgaggcagaccttgcttctgtggtaatgattgagaga 324
Query: 125 aatgcctcatttaaggagcggttcactaaggaaggcaccagtgtatagatcatcacagct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatgcctcatttaaggagcggttcactaaggaaggcaccagtgtatagatcatcacagct 384
Query: 185 taaagaggagagactctgaacacagacttttgtttaaggcgcacttgcattcaacaattc 244
||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 385 taaagaggagaaattctgaacacagacttttgtttaaggcgtacttgcattcaacaattc 444
Query: 245 ggtctgtgaagttttgaagtaggttatacaacgctgtagtatgaagaagccacagttgca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggtctgtgaagttttgaagtaggttatacaacgctgtagtatgaagaagccacagttgca 504
Query: 305 ggttttttatgttgtcagatggcacaagttgcaaaccaccatatttgatttagcaaaata 364
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 505 ggttttttatgttgtcagatggcacaagttgcaaaccaccatatttgctttagcaaaata 564
Query: 365 taacttacttttaaatttccttttgtctctgaagtctgtgtcagcatttgctccaatttg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taacttacttttaaatttccttttgtctctgaagtctgtgtcagcatttgctccaatttg 624
Query: 425 caaccctgtgctgtgttcttggggcaaaaaagcttttagtggatatttgggaccagatga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caaccctgtgctgtgttcttggggcaaaaaagcttttagtggatatttgggaccagatga 684
Query: 485 aagtaaatggaaggtaggtgattgactgctgtttctgttctcttaagttcacacacacac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aagtaaatggaaggtaggtgattgactgctgtttctgttctcttaagttcacacacacac 744
Query: 545 acacacacaca 555
|||||||||||
Sbjct: 745 acacacacaca 755
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_e19.g1 MSMg01no506_e19.g1 CHROMAT_FILE:
MSMg01no506_e19.g1 PHD_FILE: MSMg01no506_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:27 2005
(583 letters)
>mm_chr14_75309674_75310657
Length = 984
Score = 980 bits (507), Expect = 0.0
Identities = 564/583 (96%), Gaps = 2/583 (0%)
Strand = Plus / Minus
Query: 1 agttactgtagtaagatatggccctcagataagggagaggccacactatgccccagttgt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 716 agttactgtagtaagatatggccctcagataagggagaggccacactgtgccccagttgt 657
Query: 61 tctgggggtggttcaggtggtcactgctctgttgtcagccactgtacttttgtaattaat 120
|||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 656 tctgggactggttcaggtggtcactgctctgtcgtcagccactgtacttttgtaattaat 597
Query: 121 gcctcggtctggctgctgcctgctgcctgctgcctctgctgggtcgggtgaggagcaagg 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gcctcggtctagctgctgcctgctgcctgctgcctctgctgggtcgggtgaggagcaagg 537
Query: 181 tggaggagtatcagttccagggagactcccaacttctgtcaacttcctgccctcgaaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tggaggagtatcagttccagggagactcccaacttctgtcaacttcctgccctcgaaatc 477
Query: 241 ctgagctcaccctgctctgatttcattattatggttttgattacgttcccctccctccc- 299
||||||||||||||||||||||||||||||||||||||||||| || |||| ||| |||
Sbjct: 476 ctgagctcaccctgctctgatttcattattatggttttgattatgtccccccccccccca 417
Query: 300 ccatcccaaatcagaaagtggaaaaacactggattgttttgtgtgacttgtctttttgtg 359
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 416 ccatcccaaatcagaaagtggaaaaacactggattgttttatgtgacttgtctttttgtg 357
Query: 360 ttgattacatgtcatgtcctttataaagctaactttaaactgctaagatataaagcaaag 419
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttgattacatctcatgtcctttataaagctaactttaaactgctaagatataaagcaaag 297
Query: 420 gtgtcattaccgatgaaggaaacttgggacgacctgtgcatggagaagcggcccttgtag 479
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 296 gtgtcattaccgatgaaggaaacttgggacgaactgtgcatggagaagcggcccttgtag 237
Query: 480 cgtttgccttgtgacagaaactggttttttttttttgtttgtttgtttgtttttttgaga 539
||||||||||||||||||||| |||||||||||||| ||| ||| |||| ||||||||||
Sbjct: 236 cgtttgccttgtgacagaaacgggtttttttttttttttttttt-tttggttttttgaga 178
Query: 540 cagggtttctctgtatagccctggctgacctggaactcacttt 582
||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 177 cagggtttctctgtatagctctggctgacctggaactcacttt 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 984
Length adjustment: 10
Effective length of query: 573
Effective length of database: 974
Effective search space: 558102
Effective search space used: 558102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
