Query= MSMg01no508_a01.b1 MSMg01no508_a01.b1 CHROMAT_FILE:
MSMg01no508_a01.b1 PHD_FILE: MSMg01no508_a01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:45 2005
(673 letters)
>mm_chr14_67671291_67672361
Length = 1071
Score = 1226 bits (634), Expect = 0.0
Identities = 660/670 (98%), Gaps = 4/670 (0%)
Strand = Plus / Minus
Query: 5 gaattctct-aaaatttcgaacaagaaagggagacaagggggaatcagatcagtccagag 63
||||||||| |||| || |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 871 gaattctctaaaaaattagaacaaaaaagggagacaagggggaatcagatcagtccagag 812
Query: 64 tcccaataaccatgttagaggatctccagaaagcacaaatgttagagacaagaagaaaag 123
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 811 tcccaataaccatgttagaggatctccagaaagcacaaatgttagagac---aagaaaag 755
Query: 124 agaggaagttacagtttgagaaggttcaccttgcaccaccatctcagttacagagcataa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 agaggaagttacagtttgagaaggttcaccttgcaccaccatctcagttacagagcataa 695
Query: 184 caaaagcataccactgagaaagggagaaacgcagcaaggatagcaccaagatcttcagcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 caaaagcataccactgagaaagggagaaacgcagcaaggatagcaccaagatcttcagcc 635
Query: 244 cttcaactgcatcataagcagcaacaacaaaagcagtgtcttccagaacacagggagaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cttcaactgcatcataagcagcaacaacaaaagcagtgtcttccagaacacagggagaag 575
Query: 304 ttaacaagccacgtcaggctgtgccccacactaaacctgaagctagccagctatgtccag 363
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 574 ttaacaagccaggtcaggctgtgccccacactaaccctgaagctagccagctatgtccag 515
Query: 364 tctacagcactcagggctcatagctaaagaatggggcctcactacagactgagatctgtg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tctacagcactcagggctcatagctaaagaatggggcctcactacagactgagatctgtg 455
Query: 424 ttgtgtgcggttgtcaagagtaaacttcatagatgacaagagtcatgtgcccttttccca 483
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 454 ttgtgtgcggttgtcaagagtaaacttcatagatgacaagagtcatgttcccttttccca 395
Query: 484 aatagctctaggtttcagtcaagtttacagaactcaggcagccagcagcacagctgcata 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aatagctctaggtttcagtcaagtttacagaactcaggcagccagcagcacagctgcata 335
Query: 544 ggaatttattctccgatcctctaccttcttttccaagtaaattgaagtgcccttcacaaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ggaatttattctccgatcctctaccttcttttccaagtaaattgaagtgcccttcacaaa 275
Query: 604 gcttacatagcagtttattctgatacttcagtgagatccagctccgcaggggtctccctt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gcttacatagcagtttattctgatacttcagtgagatccagctccgcaggggtctccctt 215
Query: 664 taccttctta 673
||||||||||
Sbjct: 214 taccttctta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1071
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1061
Effective search space: 703443
Effective search space used: 703443
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no508_a01.g1 MSMg01no508_a01.g1 CHROMAT_FILE:
MSMg01no508_a01.g1 PHD_FILE: MSMg01no508_a01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:45 2005
(661 letters)
>mm_chr14_67515034_67516095
Length = 1062
Score = 1096 bits (567), Expect = 0.0
Identities = 641/666 (96%), Gaps = 7/666 (1%)
Strand = Plus / Plus
Query: 1 accccttgggagtactatgaccttgacaggtttgggtaagggcactagccacattggagt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 200 accccttgggagtactatgaccttgacaagtttgggtaagggcactagccacattggagt 259
Query: 61 gggctgaagaatgggctgtggtgcccaaaatatatgtgcgtctcttacaaaccaacacta 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 260 gggctgaagaatgggctgtggtgcccaaaatatatgtgcatctcttacaaaccaacacta 319
Query: 121 aaaaaa-ccaattccatggaaaaatggaattttattataaatacgcagttcacactagaa 179
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaaaaaaccaattccatggaaaaatggaattttattataaatacgcagttcacactagaa 379
Query: 180 aggccatgaataaccaggtaccatatgaaaagattcttaactcacaggtaccaaggagaa 239
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 380 aggccatgaataaccaggtaccatatgaaaagattcttaactcacagctaccagggagaa 439
Query: 240 aggtaaacaaaaattacaagagacaccagagagacgttaagagtaattgctgctctatca 299
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 440 aggtaaacaaaaattacaagagacaccagagagacgttaagagtgattgctgctctatca 499
Query: 300 gaggatgtaaattcagatcccagcacccccatctcacaaacatatgtaactccagctctg 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaggatgtaaattcagatcccagcacccccatctcacaaacatatgtaactccagctctc 559
Query: 360 agtgatctagcctctatgggcacctatacacatgtgtgcacacacacagatgc-ctccat 418
| ||||||||||||| |||||||||| |||||||||||||||||||||||||| | ||||
Sbjct: 560 aatgatctagcctctgtgggcacctacacacatgtgtgcacacacacagatgcac-ccat 618
Query: 419 aaagaaaacattaaaataagccttttatgaaaagaaaactacaatg-gt-cattatcccg 476
|||||||||||||||||||||||||||||||||||||| ||||| | || ||||||||||
Sbjct: 619 aaagaaaacattaaaataagccttttatgaaaagaaaattacaa-gagttcattatcccg 677
Query: 477 tattactggcaagtatttaaagtttgctatcaaatgctggtatgaagccatgggagacag 536
||||||||||||| ||||||| ||||||||||||||||||||||||| ||||| |||| |
Sbjct: 678 tattactggcaagcatttaaaatttgctatcaaatgctggtatgaagtcatggtagacgg 737
Query: 537 gtctcaggaaaggctcatgggagtctaaaatgaacagtctgagggtctgttatatggtca 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gtctcaggaaaggctcatgggagtctaaaatgaacagtctgagggtctgttatatggtca 797
Query: 597 gcagtttaaaa-tgactttcaccaactctaaccacctgagtttaaccctcaggncccaca 655
||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||| |
Sbjct: 798 gcagtttaaaaatgactttcaccaactctaaccacctgagttcaaccctcagggcccata 857
Query: 656 tagtgg 661
||||||
Sbjct: 858 tagtgg 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1062
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1052
Effective search space: 684852
Effective search space used: 684852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
