Query= MSMg01no509_a20.b1 MSMg01no509_a20.b1 CHROMAT_FILE:
MSMg01no509_a20.b1 PHD_FILE: MSMg01no509_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:10 2005
(620 letters)
>mm_chr14_23536910_23537929
Length = 1020
Score = 1133 bits (586), Expect = 0.0
Identities = 607/614 (98%)
Strand = Plus / Plus
Query: 5 gaattcttacattcccctctgtatttacggctctgttgtgcttttttattgaatcagaag 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 205 gaattcttacatttgtctctgtatttacggctctgttgtgcttttttattgaatcggaag 264
Query: 65 aggaatatcttcatttgcagccaaaataaaataaatctagacaggttatctagtaaactg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggaatatcttcatttgcagccaaaataaaataaatctagacaggttatctagtaaactg 324
Query: 125 actggggcacagggtatgtgttgtttatgtatgcctgcacatgtaagctacaaatgcaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actggggcacagggtatgtgttgtttatgtatgcctgcacatgtaagctacaaatgcaat 384
Query: 185 agctatttctcatatgaaattttgcattaagacctcatattcaagaaactagcattctac 244
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 385 agctatttctcatatgaaattttgcattaagacttcatattcaagaaactagcattctac 444
Query: 245 catattctatgatagtggacctatttttaccaagtcattaacccttggggtctcaaggtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catattctatgatagtggacctatttttaccaagtcattaacccttggggtctcaaggtt 504
Query: 305 gcttgaaaaacattcagaaattagaatccttctgaagtaagatacatggattttgtattt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcttgaaaaacattcagaaattagaatccttctgaagtaagatacatggattttgtattt 564
Query: 365 ctcagaattagaacacagactttaaagtcagggatgccagagaacattctagtgctctct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctcagaattagaacacagactttaaagtcagggatgccagagaacattctagtgctctct 624
Query: 425 aaactggtagcaagtgtaatggaggctagtgtaaatacttataaaggtaagttgcactct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaactggtagcaagtgtaatggaggctagtgtaaatacttataaaggtaagttgcactct 684
Query: 485 gccttagtccatacttttgccttgtcagaaaaactagacagataggtacttctaggtgac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gccttagtccatacttttgccttgtcagaaaaactagacagataggtacttctaggtgac 744
Query: 545 atatacataacaaacctagtatcgcgtgatagctttcttggtagcttgatagcttgatac 604
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 745 atatacataacaaacctagtatcgagtgataactttcttggtagcttgatagcttgatac 804
Query: 605 aatgcttactttgc 618
||||||||||||||
Sbjct: 805 aatgcttactttgc 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no509_a20.g1 MSMg01no509_a20.g1 CHROMAT_FILE:
MSMg01no509_a20.g1 PHD_FILE: MSMg01no509_a20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:10 2005
(215 letters)
>mm_chr14_23706052_23706666
Length = 615
Score = 379 bits (196), Expect = e-110
Identities = 215/232 (92%), Gaps = 17/232 (7%)
Strand = Plus / Minus
Query: 1 attctctactcataaatagatacttagtggctgatttttatctttaggcagttacaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 attctctactcataaatagatacttagtggctgatttttatctttaggcagttacaaaag 248
Query: 61 tactggtgccaaatttataaagaatgtcaaggccaaaatcctcttcttgtgtgtgtgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tactggtgccaaatttataaagaatgtcaaggccaaaatcctcttcttgtgtgtgtgtgt 188
Query: 121 gtgtgtgtgtgtgtgtgtgtgtgt-----------------gtgtgtgtacatgtttgta 163
|||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 187 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtacatgtttgta 128
Query: 164 catgagtgtatgtgtcttagagtttgatgccattcacggagtccctactcag 215
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 catgagtgtatgtgtcttagagtttgatgccattcacggagtccctactcag 76
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 615
Length adjustment: 9
Effective length of query: 206
Effective length of database: 606
Effective search space: 124836
Effective search space used: 124836
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
