Query= MSMg01no511_b12.b1 MSMg01no511_b12.b1 CHROMAT_FILE:
MSMg01no511_b12.b1 PHD_FILE: MSMg01no511_b12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:51 2005
(626 letters)
>mm_chr14_117165291_117166317
Length = 1027
Score = 712 bits (368), Expect = 0.0
Identities = 383/388 (98%), Gaps = 1/388 (0%)
Strand = Plus / Minus
Query: 240 tatttatctatgtgtttgtgtcttgtgttcttgtgagtgaatgccagctgtgtgcatatg 299
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 tatttatccatgtgtttgtgtcttgtgttcttgtgagtgaatgccagctgtgtgcatatg 968
Query: 300 ttctcagaggccctacaagtacgttacacccagcattggagttatagacagctgggagcc 359
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 ttctcagaggccctacgagtacgttacacccagcattggagttatagacagctgggagcc 908
Query: 360 acctggagtggttttttgcatctaaacccaggtcctttggaagggcaggaagcattcttg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 acctggagtggttttttgcatctaaacccaggtcctttggaagggcaggaagcattcttg 848
Query: 420 atggatgagccatacctctactcaccatgagattta-tttttttactaagagtgagtttg 478
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 847 acggatgagccatacctctactcaccatgagatttattttttttactaagagtgagtttg 788
Query: 479 actgatagagtctaaaactcttgggtgctttgcaactgtaaaactatcctttgcagaatc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 actgatagagtctaaaactcttgggtgctttgcaactgtaaaactatcctttgcagaatc 728
Query: 539 aacttcgaagaagccacagcattctatcacttcacatttaccaaaaaaatagtagcaata 598
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 aacttcaaagaagccacagcattctatcacttcacatttaccaaaaaaatagtagcaata 668
Query: 599 gcaattttatttgtagactggaattatt 626
||||||||||||||||||||||||||||
Sbjct: 667 gcaattttatttgtagactggaattatt 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1027
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1017
Effective search space: 626472
Effective search space used: 626472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_b12.g1 MSMg01no511_b12.g1 CHROMAT_FILE:
MSMg01no511_b12.g1 PHD_FILE: MSMg01no511_b12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:51 2005
(534 letters)
>mm_chr14_117123061_117123993
Length = 933
Score = 978 bits (506), Expect = 0.0
Identities = 527/534 (98%), Gaps = 1/534 (0%)
Strand = Plus / Plus
Query: 1 ttcccactgtctactctccaccaagaccattctccaacactgtccagtcaaatcaccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcccactgtctactctccaccaagaccattctccaacactgtccagtcaaatcaccttg 260
Query: 61 tccaaccacagaacagcattgctgggttcctgtcttcagcaatggctcatattggacaac 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaagcacagaacagcattgctgggttcctgtcttcagcaatggctcatattggacaac 320
Query: 121 caggcttcctcctgttcttgaagtgatcattatgggtttgtgtggatattttgtatacct 180
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 321 caggcttcctcctgttcttgaagtgatcattgtggatttgtgtggatattttgtatacct 380
Query: 181 ttcggaagtacctagtagaatcatgtgaaggctgtttagagccacaacttggctaatata 240
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcggaagtacctagtacaatcatgcgaaggctgtttagagccacaacttggctaatata 440
Query: 241 cctatgtgccagcatgtattctgtccctgacttgactcacttgattctttacacctgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctatgtgccagcatgtattctgtccctgacttgactcacttgattctttacacctgatt 500
Query: 301 ttgttatcactaataggtaatgggtcctttcctaggactgtgtttcccaaagaatccaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgttatcactaataggtaatgggtcctttcctaggactgtgtttcccaaagaatccaag 560
Query: 361 atgacagagaaaactttgttatcaatctattattcctaaaatagggcttggcaatttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgacagagaaaactttgttatcaatctattattcctaaaatagggcttggcaatttttt 620
Query: 421 tctgtgatgaggacaataagaaaacagtgtagttcatgaagactttattactggtaatca 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctgtgatgaggacaataagaaa-cagtgtagttcatgaagactttattactggtaatca 679
Query: 481 aacattctcatttaggataagcaatacataatgaatccacatgatcatattcca 534
||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aacattctcgtttaggataagcaatacataatgaatccacatgatcatattcca 733
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 933
Length adjustment: 10
Effective length of query: 524
Effective length of database: 923
Effective search space: 483652
Effective search space used: 483652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
