Query= MSMg01no511_l13.b1 MSMg01no511_l13.b1 CHROMAT_FILE:
MSMg01no511_l13.b1 PHD_FILE: MSMg01no511_l13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:40 2005
(571 letters)
>mm_chr14_77214960_77215934
Length = 975
Score = 1015 bits (525), Expect = 0.0
Identities = 561/575 (97%), Gaps = 4/575 (0%)
Strand = Plus / Plus
Query: 1 caagtagcatagagcagttgagcacactggcttagcaggaagctgttaaggttaaagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagtagcatagagcagttgagcacactggcttagcaggaagctgttaaggttaaagtta 260
Query: 61 gttacccaaattgagtcccagtttagctcagatctattagctaattgttatgaagcattt 120
||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 261 gttacccgaattgagtcccagtttagctcagatctattagctaattgctacgaagcattt 320
Query: 121 gatactctgaacacttaaaaacgagccactctggtatgtttagtttttctcctgtaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatactctgaacacttaaaaacgagccactctggtatgtttagtttttctcctgtaatct 380
Query: 181 gtaaagtgggcacaataataataagtagacttagggatatttggaagagtgcacaagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaaagtgggcacaataataataagtagacttagggatatttggaagagtgcacaagaag 440
Query: 241 cacctggaaaaccctaaaagcacggtattttccaaaggtaggaaatgcctgtcgcgtttt 300
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 441 cacctggaaaaccctaaaagcatggtattttccaaaggtaggaaatgcctgttgcgtttt 500
Query: 301 aaaactccacaaaagagcacgatctattttttaggtcatagcgttgggaaagactttata 360
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 aaaactccacaaaagagcatgatctatttcttaggtcatagcgttgggaaagactttata 560
Query: 361 tcgcaatagatattgttgccgtgtttagagatagaatacttttatagctgtccctggcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcgcaatagatattgttgccgtgtttagagatagaatacttttatagctgtccctggcca 620
Query: 421 ggaggctggtgtggaagcaggcagacgtggttgggcatcctggattcacttgccaagaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaggctggtgtggaagcaggcagacgtggttgggcatcctggattcacttgccaagaga 680
Query: 481 acacgcagctgtgcaattggtatcaaccccaaccatagagctgttccgga----acagga 536
||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 681 acacgcagctgtgcaattgatatcaaccccaaccatagagctgttccggacagaacagga 740
Query: 537 cagttctgagtcagggagagtgggaagcgacagag 571
|||||||||||||||||||||||| ||| ||||||
Sbjct: 741 cagttctgagtcagggagagtggggagcaacagag 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 975
Length adjustment: 10
Effective length of query: 561
Effective length of database: 965
Effective search space: 541365
Effective search space used: 541365
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_l13.g1 MSMg01no511_l13.g1 CHROMAT_FILE:
MSMg01no511_l13.g1 PHD_FILE: MSMg01no511_l13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:40 2005
(422 letters)
>mm_chr14_77394096_77394915
Length = 820
Score = 735 bits (380), Expect = 0.0
Identities = 411/422 (97%), Gaps = 2/422 (0%)
Strand = Plus / Minus
Query: 1 cagaagaccaggctagactctggacattgcttcccttccttaaacctgagcattggagct 60
|||||||||||||||||||||| |||||| || |||||||| ||||||||||||||||||
Sbjct: 447 cagaagaccaggctagactctgaacattgtttgccttccttgaacctgagcattggagct 388
Query: 61 gggttggacctgatttcccagttgctttcactgtaaaagctgttacaaacatttcagtag 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gggttggaccttatttcccagttgctttcactgtaaaagctgttacaaacatttcagtag 328
Query: 121 atcgctgatagaataaaactaggaaaaaaaatgtgcatggctcaagttctgcttccataa 180
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 327 atcgctgatagaataaaactagg--aaaaaatgtgcatggctcaagttctgcttccataa 270
Query: 181 tggctcagagagtgatttacataatctataggagatgaatatctttggagaatgttgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tggctcagagagtgatttacataatctataggagatgaatatctttggagaatgttgtct 210
Query: 241 tcttactacttttaatttttattttttttttaactatttacttatgtatttttgaagcaa 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 209 tcttactacttttaatttttattttgtttttaactatttacttatgtatttttgaagcaa 150
Query: 301 ggtcttgctttgtagccctggcctatctggaacttgatatgtagcccaggttggcctcaa 360
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 149 ggtcttgctttgtagccctggcctatccagaacttgatatgtagcccaggttggcctcaa 90
Query: 361 ggaggaggtaatcctcctgcctttgcctctgaagtgctgggatcgcaggcatgcaccacc 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ggaggagataatcctcctgcctttgcctctgaagtgctgggatcgcaggcatgcaccacc 30
Query: 421 ag 422
||
Sbjct: 29 ag 28
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 820
Length adjustment: 9
Effective length of query: 413
Effective length of database: 811
Effective search space: 334943
Effective search space used: 334943
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|