Query= MSMg01no514_c18.b1 MSMg01no514_c18.b1 CHROMAT_FILE:
MSMg01no514_c18.b1 PHD_FILE: MSMg01no514_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:57 2005
(631 letters)
>mm_chr14_116655529_116656563
Length = 1035
Score = 1096 bits (567), Expect = 0.0
Identities = 614/631 (97%), Gaps = 4/631 (0%)
Strand = Plus / Minus
Query: 5 gaattctttgtgtgttatgggctcctctgcaagtatcttcttgaatagtaaacttagctc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gaattctttgtgtgttatgggctcctctgcaagtatcttcttgaatagtaaacttagctc 776
Query: 65 tttccataacaaatatggaagtcttacacttaacatattttctctgattctacctgctat 124
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 775 tttccataacaaatatggaagtcttacacttaatatattttctctgattctacctgctat 716
Query: 125 ttctgcatgtggtacctgccccatttcatacaggcttttatgaactaggacttaaaccac 184
||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 715 ttctgcatgtggtaccttccccatttcatataggcttttatgaactaggacttgaaccac 656
Query: 185 tcatggatgagcccgatgcccttagtcctgccactgtgagcagggtctgctttccttaat 244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 655 tcatggatgagcccgatgcccttagtcctgccactgtgagaagggtctgctttccttaat 596
Query: 245 catttggaaaggaagtcaaaccacacgagaacttctaccccagagggctctagacatatg 304
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 595 catttggaaaggaaatcaaaccacacgagaactcctaccccagagggctctagacatctg 536
Query: 305 tcagtctggaaatct---gagtagacatagcagaagcaaaagtttgaaaaggtatctgtt 361
||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 535 tcagtctggaaatcttctgagcagacatagcagaagcaaaagtttggaaaggtatctgtt 476
Query: 362 aaaagggtggcttttct-gaaccaatgatctttctcactggctttaaattgtgttattag 420
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aaaagggtggctttttttgaaccaatgatctttctcactggctttaaattgtgttattag 416
Query: 421 cattaaacttcctgaggcaaatgactaaaactaattgcattcgtgagaagaacttcagta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cattaaacttcctgaggcaaatgactaaaactaattgcattcgtgagaagaacttcagta 356
Query: 481 gtattcccaaatgtgtaatttcatttttcatgcttacagttacactcatccgtgatggaa 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 355 gtattcccaaatgtgtaatttcatttttcatgcttacagttacattcatccgtgatggaa 296
Query: 541 tactctattgtacttttcacagtatttagaattatgtatgatatttgaatttaaatgagt 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tactccattgtacttttcacagtatttagaattatgtatgatatttgaatttaaatgagt 236
Query: 601 taattgacttagtttacttgaaatgaccgag 631
|||||||||||||||||||||||||||||||
Sbjct: 235 taattgacttagtttacttgaaatgaccgag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1035
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1025
Effective search space: 636525
Effective search space used: 636525
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_c18.g1 MSMg01no514_c18.g1 CHROMAT_FILE:
MSMg01no514_c18.g1 PHD_FILE: MSMg01no514_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:58 2005
(616 letters)
>mm_chr14_116501012_116502027
Length = 1016
Score = 1145 bits (592), Expect = 0.0
Identities = 611/618 (98%), Gaps = 5/618 (0%)
Strand = Plus / Plus
Query: 1 caatttactgctggtgggactatagattgatccaattgctatgaaaatctgtataaagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 caatttactgctggtgggactatagattgatccaattgctatgaaaatctgtataaagtt 261
Query: 61 tggcaaaaaaa-ccctaaaattagaactagctgtacttttcctaggtacaccaaaacacc 119
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tggcaaaaaaacccctaaaattagaactagctgtacttttcctaggtacaccaaaacacc 321
Query: 120 ctaaatcctactacagatacacctgcacctgtgtttatgtgtatatttgtacagcatata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctaaatcctactacagatacacctgcacctgtgtttatgtgtatatttgtacagcatata 381
Query: 180 agaaatgaaaacattccacatgtctgtcaatggatgaatgaatgcagaaaacaaataaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agaaatgaaaacattccacatgtctgtcaatggatgaatgaatgcagaaaacaaataaca 441
Query: 240 tatataaaatggaagtttatttggtcataaagaacaatgataacataatgttgtcaggaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tatataaaatggaagtttatttggtcataaagaacaatgataacataatgttgtcaggaa 501
Query: 300 aatgagtggaatagaaagctttaaatttaacaaaccaagagcaatagatgttattacttc 359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 502 aatgagtggaatagaaagctttaaatttaacaaaccaagagcaatagattttattacttc 561
Query: 360 ttgttcttatgtgttcatcctaaatcttaattttatgtatatgtgtgttaagtcacatac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttgttcttatgtgttcatcctaaatcttaattttatgtatatgtgtgttaagtcacatac 621
Query: 420 acacacatatatatgtgtacatacataaatataacttgcttcatggcttatactatatat 479
|||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 622 acacacatatat--gtgtacatacataaatataacttgcttcatggcttgtactatatat 679
Query: 480 gaaatatatgttatgtatataataaattttgaaagggatcatgggatatatcttaaatgt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaaatatatgttatgtatataataaattttgaaagggatcatgggatatatcttaaatgt 739
Query: 540 gggggaagaaatacatgggaaagagaagagcagagataaggag-taaaaacaacataata 598
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 740 gggggaagaaatacatgggaaagagaagagcagagataag-aggtaaaaacaacataata 798
Query: 599 tgcaaatgacttaatgaa 616
||||||||||||||||||
Sbjct: 799 tgcaaatgacttaatgaa 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
