Query= MSMg01no514_j20.b1 MSMg01no514_j20.b1 CHROMAT_FILE:
MSMg01no514_j20.b1 PHD_FILE: MSMg01no514_j20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:34 2005
(652 letters)
>mm_chr14_84737711_84738761
Length = 1051
Score = 1208 bits (625), Expect = 0.0
Identities = 643/649 (99%), Gaps = 1/649 (0%)
Strand = Plus / Minus
Query: 4 ggaattctatgtcagttttctagggcctgactctagcaagtgtgtgctgtatattattta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 ggaattctatgtcagttttctagggcctgactctagcaagtgtgtgctgtatattattta 792
Query: 64 gagtgtaatgagaaaacttcagaaggcttcaatagacaaactacctagtgcttgacacat 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gagtgtaatgagaaaacttcagaaggcttcaatagacaaactacctagtgcttgacacac 732
Query: 124 catgcgctggaaactgacaccagctcccccctacagcctcttatcatcatttttgtcttc 183
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 catgagctggaaactgacaccagctcccccctacagcctcttatcatcatttttgtcttc 672
Query: 184 ctcattttgatcagaacatttgtggtcacttatattcataaatagattactctggacaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ctcattttgatcagaacatttgtggtcacttatattcataaatagattactctggacaat 612
Query: 244 catattcccacattcacaaagaaacctagcagtatcacaataagaagaaaaaataagtac 303
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 611 catattcccacattcacaaagaaacctagcagtatcacaataagcagaaaaaataagtac 552
Query: 304 tgttctgaaagtttcttttattttttaaaaaacaagaaagcatggatttcacagtagata 363
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 551 tgttctgaaagtttcttttatttttaaaaaaacaagaaagcatggatttcacagtagata 492
Query: 364 ttttatgaatcactgatgggccaaatatacttcatatttccatcagttagctttgtataa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttttatgaatcactgatgggccaaatatacttcatatttccatcagttagctttgtataa 432
Query: 424 gtatttttagccctcacacagatttcctattctaacgtcagaattcattcccatcttcaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gtatttttagccctcacacagatttcctattctaacgtcagaattcattcccatcttcaa 372
Query: 484 aatagctttgtgagaaagtttgacaagcttatatctaattattgttctgcaaaaactggc 543
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 371 aatagctttgtgagaaagtttgacaagattatatctaattattgttctgcaaaaactggc 312
Query: 544 accaggcaggaaaaaaattttttttcttcagaaaatttaaagaataaatgagagaacata 603
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 accaggcaggaaaaaaa-tttttttcttcagaaaatttaaagaataaatgagagaacata 253
Query: 604 cattgtaaaaaaaaaaagtcatttgtaaaatcaagaacaacaatatagc 652
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cattgtaaaaaaaaaaagtcatttgtaaaatcaagaacaacaatatagc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1051
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1041
Effective search space: 668322
Effective search space used: 668322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_j20.g1 MSMg01no514_j20.g1 CHROMAT_FILE:
MSMg01no514_j20.g1 PHD_FILE: MSMg01no514_j20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:34 2005
(638 letters)
>mm_chr14_84583916_84584953
Length = 1038
Score = 1071 bits (554), Expect = 0.0
Identities = 616/646 (95%), Gaps = 18/646 (2%)
Strand = Plus / Plus
Query: 1 cttaattcagttgaatatgattcattttcattcaacagtaattccctttcgcacagaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cttaattcagttgaatatgattcattttcattcaacagtaattccctttcgcacagaagt 262
Query: 61 ttttgtcctccaagccttataaagctaaatatatatattcatattatataagtaattaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 263 ttttgtcctccaagccttataaagctaaatatatatattcatattatatgagtaattaaa 322
Query: 121 tatatatat--catatgagtactaatatacatatagatgtatatatacacacaaacacac 178
||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 323 tatatatatatcatatgagtactaatatacatatatatgcatatatacacacaaacacac 382
Query: 179 atatacatacatatgtatatatatatatatatatatatacatatgtatgtacatgtaca- 237
|||||||| ||||||||||||||| | || ||||||||||||||||||||
Sbjct: 383 atatacatg----tgtatatatatatatgtgta------catatgtatgtacatgtacac 432
Query: 238 -----tacacacacacaaagtgaagtatctaaagtgctcactcaatttctattagttttc 292
||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 433 acacatacacacacacaaagtgaagtatctaaagtgctcactcaatttctattatttttc 492
Query: 293 ttacatatggaactggccctacagttggatatgatggtgtgcatgtttgatctgcacttg 352
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 493 ttacatatggaactggccctacagttggatatgatggtgtgcgtgtttgatctgcacttg 552
Query: 353 gggacaggctagttgatttcttttccttggagtgacgggccagctagggctatgtagtga 412
| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 553 gagacaggctagttgatttcttttccttggagtcacgggccagctagggctatgtagtga 612
Query: 413 aatcctgtttccaaaccaactaatgaagaagtgtaaatcaacatatcatattttccatta 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aatcctgtttccaaaccaactaatgaagaagtgtaaatcaacatatcatattttccatta 672
Query: 473 atgatgatgcatgttacatagtataagattaagtctccttcctagtctaacagaatgtag 532
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 673 gtgatgatgcatgttacatagtataagagtaagtctccttcctagtctaacagaatgtag 732
Query: 533 gaaagaaacaccatattagaggaaagaaatttattttggtgtatgatttcagaagacttc 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gaaagaaacaccatattagaggaaagaaatttattttggtgtatgatttcagaagacttc 792
Query: 593 agtgtgtcttggctagaaaaccatagcaataagagtagagcaacca 638
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 agtgtgtcttggctagaaaaccatagcaataagagtagagcaacca 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
