Query= MSMg01no514_k20.b1 MSMg01no514_k20.b1 CHROMAT_FILE:
MSMg01no514_k20.b1 PHD_FILE: MSMg01no514_k20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:39 2005
(678 letters)
>mm_chr14_82043932_82045011
Length = 1080
Score = 1257 bits (650), Expect = 0.0
Identities = 669/676 (98%), Gaps = 2/676 (0%)
Strand = Plus / Plus
Query: 5 gaattctaagtttatctgtgtcatgttagggtatttgctcagtttttcctactgtacata 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaagtttaactgtgtcatgttagggtatttgctcagtttttcctactgtacata 264
Query: 65 tgaaagcataaagaatatctcacacccatttttacataattttttcaacctacagagtac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgaaagcataaagaatatctcacacccatttttacataattttttcaacctacagagtac 324
Query: 125 tgagtaaagaaaataaaaataaaaagagtagtgaatttgggtgaattaaattgatctgca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgagtaaagaaaataaaaataaaaagagtagtgaatttgggtgaattaaattgatctgca 384
Query: 185 ctagggctggagtgatggcttagcggttaagaacactgactgttcttctgaaggtcctga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctagggctggagtgatggcttagcggttaagaacactgactgttcttctgaaggtcctga 444
Query: 245 gttcaaatcccatcgaccacatggtgactcacaaccatccgtaatgggctctgacaccct 304
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 445 gttcaaatcccagcgaccacatggtgactcacaaccatccgtaatgggatctgacaccct 504
Query: 305 cttcttgtgtgtctgaagacatctacagtgtacttacatatagtaataaataaatctttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttcttgtgtgtctgaagacatctacagtgtacttacatatagtaataaataaatctttt 564
Query: 365 ttaaaaattgatctgcactaaataagagaataccaaaacaaaacattgaccaatgttttt 424
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taaaaaattgatctgcactaaataagagaataccaaaacaaaacattgaccaatgttttt 624
Query: 425 ttttt--cctcatgcaatttagaatatttgttcctctaatgctgtttttgaagaatttaa 482
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttttttcctcatgcaatttagaatatttgttcctctaatgctgtttttgaagaatttaa 684
Query: 483 atttgaaatacaattgtttatctgacaggagttttgtgttaaagtttattgttttatcat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atttgaaatacaattgtttatctgacaggagttttgtgttaaagtttattgttttatcat 744
Query: 543 tctcttatttccaactttagaccaaaattatacattttgtttaatgagaaatctaaagtt 602
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tctcttatttccaactttagtccaaaattatacattttgtttaatgagaaatctaaagtt 804
Query: 603 tacgtccttcatgactcctaattattccagaaatacttcatgtgtaactgctggaaagaa 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tacgtccttcatgactcctaattattccagaaatacttcatgtgtaactgctggaaagaa 864
Query: 663 ctgcatccttcctgca 678
||||||||||||||||
Sbjct: 865 ctgcatccttcctgca 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1080
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1070
Effective search space: 714760
Effective search space used: 714760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_k20.g1 MSMg01no514_k20.g1 CHROMAT_FILE:
MSMg01no514_k20.g1 PHD_FILE: MSMg01no514_k20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:40 2005
(634 letters)
>mm_chr14_82184032_82185065
Length = 1034
Score = 903 bits (467), Expect = 0.0
Identities = 473/475 (99%)
Strand = Plus / Minus
Query: 1 cctgtgatctttttctatggcctcttcagtacttgacaatgaatagtaagctctattaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 475 cctgtgatctttttctatggcctcttcagtacttgacaatgaatagtaggctctattaaa 416
Query: 61 atttgtcccagatttatgctagtataatttgactgtctcacttttcctttgtagtttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atttgtcccagatttatgctagtataatttgactgtctcacttttcctttgtagtttgga 356
Query: 121 atgctgtaggctttgatcagtgataatttgcttcccttgaccataactatcaactctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 atgctgtaggctttgatcagtgataatttgcttcccttgaccataactatcaactctgct 296
Query: 181 ttcattaggcatgactcctggtagtcccttgtctatgtccttaaagtcaagcacttcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttcattaggcatgactcctggtagtcccttgtctatgtccttaaagtcaagcacttcctt 236
Query: 241 tacacatgtataaattaccaccaatgtagttaagacactttgattgataatagcccttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tacacatgtataaattaccaccaatgtagttaagacactttgattgataatagcccttac 176
Query: 301 aacaatcataggctaacaaaaaacctagaatcaagtacaagagagctccttttccagtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 aacaatcataggctaacaaaaaacctagaatcaagtacaagagagctccttttccagtcc 116
Query: 361 ttggtgaaggtaatccacatgactcccaaatcaatgtagaatatctatatagcagttggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 ttggtgaaggtaatccacatgactcccaaatcaatgtagaatatctatatagcagttggt 56
Query: 421 tggctgtctgggggtgagggagtgttgaaggtgggttcctaggctgaaggcacta 475
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 55 tggctgtctgggggtgagggagtgttcaaggtgggttcctaggctgaaggcacta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
