Query= MSMg01no514_l09.b1 MSMg01no514_l09.b1 CHROMAT_FILE:
MSMg01no514_l09.b1 PHD_FILE: MSMg01no514_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:42 2005
(695 letters)
>mm_chr14_10322663_10323757
Length = 1095
Score = 1261 bits (652), Expect = 0.0
Identities = 682/692 (98%)
Strand = Plus / Plus
Query: 4 ggaattctgttgcattatcccaacataatttaagccattattgctttttccatttcctta 63
|||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 204 ggaattctgttgcaaaatcccaacataatttaagtcatcattgctttttccatttcctta 263
Query: 64 ttgatggatctaaatgcttggtccagttttctccttagtgtagatgtgctaagatgtaca 123
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 264 ttgatggatctaaatgtttggtccagttttctccttagtgtagaagtgctaagatgtaca 323
Query: 124 gttagccaggtagttagctatggcatcttgcttttcaaatcagccctaggagaacatttt 183
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 324 gttagccaggtagttagctatgccaccttgcttttcaaatcagccctaggagaacatttt 383
Query: 184 ctatgtagatagcatcagttggaatggaactgtgacatttgcatcatgcattttgagttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctatgtagatagcatcagttggaatggaactgtgacatttgcatcatgcattttgagttg 443
Query: 244 cccagcaacattttattacctattcagtgctatctagtaaaggaaatgcatgtggctctt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cccagcaacattttattacctattcagtgctatctagtaaaggaaatgcatgtggctctt 503
Query: 304 gtgatttttttacaaatctaaataaccagagatgcatttttgtcctctgtggtgcctcca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtgatttttttacaaatctaaataaccagagatgcatttttgtcctctgtggtgcctcca 563
Query: 364 gcagcaggagagaatgtcacagccctgtttctgcagtcttccagcagcaagactgtatat 423
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 564 gcagcaggagagaatgtcacagccctgtttctgccgtcttccagcagcaggactgtatat 623
Query: 424 gagtagcattgtatcctggctactaaacttgatcaggccctctcttaaaaggggaggcat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gagtagcattgtatcctggctactaaacttgatcaggccctctcttaaaaggggaggcat 683
Query: 484 atgggtacagtgctaattataatccagatattcaaagtttgatgctgaaagaaagacact 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atgggtacagtgctaattataatccagatattcaaagtttgatgctgaaagaaagacact 743
Query: 544 agcttcgagaaggattgtttagtggattattagatatggaggagatttctaaaacattta 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agcttcgagaaggattgtttagtggattattagatatggaggagatttctaaaacattta 803
Query: 604 ttttggtctcagatgtcagactatcatgtaaacaaaatagaaacatagttccaagataaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttttggtctcagatgtcagactatcatgtaaacaaaatagaaacatagttccaagataaa 863
Query: 664 tgctgcactttccatattttagactcatggct 695
||||||||||||||||||||||||||||||||
Sbjct: 864 tgctgcactttccatattttagactcatggct 895
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_l09.g1 MSMg01no514_l09.g1 CHROMAT_FILE:
MSMg01no514_l09.g1 PHD_FILE: MSMg01no514_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:42 2005
(627 letters)
>mm_chr14_10476403_10477425
Length = 1023
Score = 1135 bits (587), Expect = 0.0
Identities = 618/635 (97%), Gaps = 12/635 (1%)
Strand = Plus / Minus
Query: 1 caggaatgaaaattatagcaactcacagaaaagacatggctggcaaacgtgattaggagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 caggaatgaaaattatagcaactcacagaaaagacatggctggcaaacgtgattaggagt 750
Query: 61 tattgtttaaacccaggggcatagaattctccctgctggtgaacttaagttaagtaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tattgtttaaacccaggggcatagaattctccctgctggtgaacttaagttaagtaagtt 690
Query: 121 taatgtggtgtaatttaattactaagcatagttttcttctcagtgggaagagataccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 taatgtggtgtaatttaattactaagcatagttttcttctcagtgggaagagataccagg 630
Query: 181 tttttgctaagaacaaaaggaaggctgtaaatagccctcagtgatggctggctactaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 629 tttttgctaagaacaaaaggaaggctgtaaatagccctcagtgatggctggttactaagg 570
Query: 241 gggaaaaaaatctaagagcattcagctgtcttttgcataatgtttgagggtagatgcatc 300
||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 569 ggg----aaatctaagagcattcagctgtcttctgcataatgtttgagggtagatgcatc 514
Query: 301 ctggactcattgtaaattttatttaattaatgctttgaggattaacagcaaagcagacct 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ctgaactcattgtaaattttatttaattaatgctttgaggattaacagcaaagcagacct 454
Query: 361 tgcagcccggaatataaagcttctgggattacccagaaagtgattttccccagaaaggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tgcagcccggaatataaagcttctgggattacccagaaagtgattttccccagaaaggat 394
Query: 421 gtccccattaataattaatgccaggcgttttcataaatgtcagattcccactgcaagcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gtccccattaataattaatgccaggcgttttcataaatgtcagattcccactgcaagcag 334
Query: 481 caacttgaccctcagtaataaaccatttaagattcattaaagggaagcatcattcttaaa 540
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 333 caacttgaccctcagtaataaaccatttaagattcattaaagagaagcatcattcttaaa 274
Query: 541 ctgcttgccatggcacgtgagctcatccataatgtaaaatgttggcattagttgtgttaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ctgcttgccatggcacgtgagctcatccataatgtaaaatgttggcattagttgtgttaa 214
Query: 601 aaaca--------caaaaaaagccagcacgtggct 627
||| | ||||||||||||||||||||||
Sbjct: 213 aaaaaaaaaaaaacaaaaaaagccagcacgtggct 179
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1023
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1013
Effective search space: 625021
Effective search space used: 625021
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
