Query= MSMg01no515_b03.b1 MSMg01no515_b03.b1 CHROMAT_FILE:
MSMg01no515_b03.b1 PHD_FILE: MSMg01no515_b03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:13 2005
(526 letters)
>mm_chr14_26045862_26046788
Length = 927
Score = 940 bits (486), Expect = 0.0
Identities = 507/514 (98%), Gaps = 3/514 (0%)
Strand = Plus / Plus
Query: 14 gaattcttcctgaacatcca-taactcctggcaaacacatcctgatgagtaacacgaagt 72
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gaattcttcctgaacatcaaataactcctggcaaacacatcctgatgagtaacacgaagt 273
Query: 73 gaaatagaaccagatgggctgactcgctctgggcttgcgcgggagggggaagggcggatc 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gaaatagaaccagatgggctgactcgctctgggcttgcgcgggagggggaagggcggatc 333
Query: 133 tcactcacagagaggctgggctgtgggccacaggaagtgcatcgggaggggggcacagcc 192
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 334 tcactcacagagaggctgggctgtgggccacaggaagtgcatcaggaggggggcacagcc 393
Query: 193 ttccaagcagggaggggacaaagtcccctggactttgccggagatggagtcacactgcct 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ttccaagcagggaggggacaaagtcccctggactttgccggagatggagtcacactgcct 453
Query: 253 gccatctggctttgttgggaagagaaaagaaatggggtttctggcagcctgttggtggca 312
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 454 gccatctggctttgttgggaagagaaaagaaatggggtttccggcagcctgttggtggca 513
Query: 313 ccccagcagtgtggatcatgccaagcctggcatctatggcacttgggacccaggggactc 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ccccagcagtgtggatcatgccaagcctggcatctatggcacttgggacccaggggactc 573
Query: 373 tgagacataagctcctgtgatagggagattggatggccagtgtatttagaatcctctaag 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tgagacataagctcctgtgatagggagattggatggccagtgtatttagaatcctctaag 633
Query: 433 aacctcctgaggactccgctaattatccaaacaagagctcgctctctctctctctctctc 492
||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||
Sbjct: 634 aacctcctgaggactccgcgaattatccaaacaagag-t-gctctctctctctctctctc 691
Query: 493 tctctctctctctctctctctctctctctctctc 526
||||||||||||||||||||||||||||||||||
Sbjct: 692 tctctctctctctctctctctctctctctctctc 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 89
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 927
Length adjustment: 10
Effective length of query: 516
Effective length of database: 917
Effective search space: 473172
Effective search space used: 473172
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_b03.g1 MSMg01no515_b03.g1 CHROMAT_FILE:
MSMg01no515_b03.g1 PHD_FILE: MSMg01no515_b03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:13 2005
(659 letters)
>mm_chr14_26217603_26218662
Length = 1060
Score = 1168 bits (604), Expect = 0.0
Identities = 646/660 (97%), Gaps = 1/660 (0%)
Strand = Plus / Minus
Query: 1 tctaccagatagatgacagttgccactaaccgggatggaagccagtgcagttggggatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 tctaccagatagatgacagttgccactaaccgggatggaagccagtgcagttggggatgg 801
Query: 61 cagggggacgacatctttgcaagtgttctccggtcacatggacctgggctaggttgggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cagggggacgacatctttgcaagtgttctccggtcacatggacctgggctaggttgggca 741
Query: 121 gtgtgaccttacacagctcatttcttcttttgggacctttctcccttccatttgc-aaaa 179
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 740 gtgtgaccttacacagctcatttcttattttgggacctttctcccttccatttgcaaaaa 681
Query: 180 aatctcctcaggaagaaatgagaagggcccaagctgtcctagcacctagaaaaggtgtca 239
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 680 aatatcctcaggaagaaatgagaagggcccaagctgttctagcacctagaaaaggtgtca 621
Query: 240 cacacagtaagtggctcttgctgtcctcccctggacactgagctggttatgacaggctta 299
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 620 cacacagtaagtggctcttgctgtcctcccctggacactgagctggttataacaggctta 561
Query: 300 gtgtcttttccaaaggggtaggtgaaagaattttcatgttggaggtgctggctccgtgtc 359
||||||||||||||||||||||||||| |||| ||||||| |||||||||||| |||||
Sbjct: 560 gtgtcttttccaaaggggtaggtgaaaaaattctcatgttagaggtgctggctaggtgtc 501
Query: 360 tctcccttgcagctagctagccctgtcaacctggagtcctattctttaggccgaatgtca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctcccttgcagctagctagccctgtcaacctggagtcctattctttaggccgaatgtca 441
Query: 420 ggctttgagtcccaggttcatctctgtgtggtcatgaaagggggcttgctccctgaaggc 479
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 440 ggctttgagtcccaggttcatctctgtgtgtttatgaaagggggcttgctccctgaaggc 381
Query: 480 aagtggtttccacctttctccatgatcttcatgggtgcctggcacaacctcagattcagt 539
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 380 aagtggtttccacctttctccatgatcttcatgggtgcctggcacaacctcaaatttagt 321
Query: 540 ggcaaagaaggactggtgtgttgtatacaaatgccctgagcagggagctagagtttgttc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggcaaagaaggactggtgtgttgtatacaaatgccctgagcagggagctagagtttgttc 261
Query: 600 ccatgatcctcttggtgataaggaaactgaggcacgggaggaggggctgtgtggggtaga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ccatgatcctcttggtgataaggaaactgaggcacgggaggaggggctgtgtggggtaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1060
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1050
Effective search space: 681450
Effective search space used: 681450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
