Query= MSMg01no515_c15.b1 MSMg01no515_c15.b1 CHROMAT_FILE:
MSMg01no515_c15.b1 PHD_FILE: MSMg01no515_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:21 2005
(427 letters)
>mm_chr14_60722616_60723441
Length = 826
Score = 745 bits (385), Expect = 0.0
Identities = 412/421 (97%), Gaps = 1/421 (0%)
Strand = Plus / Minus
Query: 7 ggaattctgggaatatttgactctaacaaatgtgacttatgtaaacctcaaggtaactct 66
||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 626 ggaattctgggaaga-atgactctaacaaatgtgacttatgtaaacatcaaggtaactct 568
Query: 67 gtaccaggtgtttggtgagtgcctttcgtaaccacagccatctcagctaatgggtccttt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gtaccaggtgtttggtgagtgcctttcgtaaccacagccatctcagctaatgggtccttt 508
Query: 127 ataagtttcttgcttatagaattacacattgtcatttgaaattgtaataagtacattttg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ataagtttcttgcttatagaattacacattgtcatttgaaattgtaataagtacattttg 448
Query: 187 taacttagccatgtccagttctgctcaagggtcatttacagttaagagacttattctttt 246
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 447 taacttagccatgtccagttctgcttaagggtcatttacagttaagagacttattctttt 388
Query: 247 cgtttcttcaagcataagttggggttgtaactgtgcgttgcacatgattttcttataccc 306
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 catttcttcaagcataagttggggttgtaactgtgcgttgcacatgattttcttataccc 328
Query: 307 agtgtggtcattgtgctgagattgtgttaacatcctctataccagatgagcaaacgtttt 366
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 327 agtgtggtcattgtgctgagattgtgttaacatcctctataccagatgagcaaatgtttt 268
Query: 367 tatagagttcagaaaatttaccgtatggatgagagtttagctctcagcagcaaccattca 426
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 267 tatagagttcagaaaatttaccgtagggatgagtgtttagctctcagcagcaaccattca 208
Query: 427 a 427
|
Sbjct: 207 a 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 826
Length adjustment: 9
Effective length of query: 418
Effective length of database: 817
Effective search space: 341506
Effective search space used: 341506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_c15.g1 MSMg01no515_c15.g1 CHROMAT_FILE:
MSMg01no515_c15.g1 PHD_FILE: MSMg01no515_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:22 2005
(665 letters)
>mm_chr14_60534245_60535311
Length = 1067
Score = 1120 bits (579), Expect = 0.0
Identities = 643/665 (96%), Gaps = 6/665 (0%)
Strand = Plus / Plus
Query: 1 tctgatttctaaaattctaataccctcagataccacccacccattaaaacaaacgaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgatttctaaaattctaataccctcagataccacccacccattaaaacaaacgaaagt 260
Query: 61 atagaagaatgcacaaaagaccgacagacagatgtagcctggcgcttgtatgtttgcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagaagaatgcacaaaagaccgacagacagatgtagcctggcgcttgtatgtttgcaca 320
Query: 121 gggattatctcccaactggttcactttggtctcaatgactggtgaggccaagtggtgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggattatctcccaactggttcactttggtctcaatgactggtgaggccaagtggtgaaa 380
Query: 181 gacattagtaggaacagttgcttagaatgagaacaaatgcttgctgcatttctcagatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacattagtaggaacagttgcttagaatgagaacaaatgcttgctgcatttctcagatga 440
Query: 241 cccagtgtcaagaatttgaaagacaagtgtgagagaggctgtctgtctgtctgtcttccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccagtgtcaagaatttgaaagacaagtgtgagagaggctgtctgtctgtctgtcttccc 500
Query: 301 ctctctctcatttgtatgcctgtcagggtacaaaccacaggagattcaacactggaactg 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctctctcgtttgtatgcctgtcagggtacaaaccacaggagattcaacactggaacca 560
Query: 361 tggctgatc--ggccaactgatcaaacgggaaacaacagaaacccaggcactcagcaggc 418
||||||| | ||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 tggctgagctaggctaactgatcaaatgggaaacaacagaaacccaggcactcagcaggc 620
Query: 419 atggtaccctgctgac-gaaggggc-acagtgaggctgccaggactttattacagccgga 476
|||||||||||||| | | ||| || | ||||| ||||||||||||||||||||||||||
Sbjct: 621 atggtaccctgctg-ctgcaggagcga-agtgatgctgccaggactttattacagccgga 678
Query: 477 agacttgtgcccctcacaggctcccaaaatgcagcaactttagttagctccatcatctgc 536
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 agactcgtgcccctcacagactcccaaaatgcagcaactttagttagctccatcatctgc 738
Query: 537 cacagcaactgtggaaaactgtggcctaagtgtggccaattgaaaacagagcatcaagaa 596
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 739 cacagcaactgtggaaaactgtggcctaggtgtggccaactgaaaacagagcatcaagaa 798
Query: 597 tttaggatagatctccgtgatttctttcatctatctgtctgctgttttgagttcattaca 656
||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 799 tttaggatagatctccgtggcttctttcatctagctgtctgctgttttgagttcattaca 858
Query: 657 atgac 661
|||||
Sbjct: 859 atgac 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1067
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1057
Effective search space: 692335
Effective search space used: 692335
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
