Query= MSMg01no516_d15.b1 MSMg01no516_d15.b1 CHROMAT_FILE:
MSMg01no516_d15.b1 PHD_FILE: MSMg01no516_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:52 2005
(678 letters)
>mm_chr14_122651620_122652698
Length = 1079
Score = 1282 bits (663), Expect = 0.0
Identities = 672/675 (99%), Gaps = 1/675 (0%)
Strand = Plus / Minus
Query: 5 gaattcaggaccaccggaagagcagtcagtgctcctaacctctgagtcatctctccagcc 64
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 939 gaattcaggaccaccggaagagcagtcagtgctcctaacctatgagtcatctctccagcc 880
Query: 65 tgagagactgtctttaaagctcaattttaagatacacttt-aaaaaaaaaaatctggaag 123
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 879 tgagagactgtctttaaagctcaattttaagatacactttaaaaaaaaaaaatctggaag 820
Query: 124 tcgttatgcaaattttggaataataaatattttcaaacatttgagttttctaaaggatta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 tcgttatgcaaattttggaataataaatattttcaaacatttgagttttctaaaggatta 760
Query: 184 ttttaattttccccttaattttaaaattccatttcatattttcctaccctttacttttag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 ttttaattttccccttaattttaaaattccatttcatattttcctaccctttacttttag 700
Query: 244 aaaacacataataagcttttttgcttttttcaacctctcacagaactgttgagtttttat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aaaacacataataagcttttttgcttttttcaacctctcacagaactgttgagtttttat 640
Query: 304 aaaagtataaaatttgaaacatgcataaaaagactgtaaatgtaccagcaacactgggct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aaaagtataaaatttgaaacatgcataaaaagactgtaaatgtaccagcaacactgggct 580
Query: 364 atgcttctgtaactattacttctagcaatttcataagaagaagtacattttcttgagtcg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 atgcttctgtaactattacttctagcaatttcataagaagaagtacattttcttgagtcg 520
Query: 424 tgtgatgtctttagcaacaagactcccatgggctttaatggaagtcacgcagctaaaact 483
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tgtgctgtctttagcaacaagactcccatgggctttaatggaagtcacgcagctaaaact 460
Query: 484 ccatgccccactttgaaaatttaagagtaattgctaagtcccccttagagggtcatagaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ccatgccccactttgaaaatttaagagtaattgctaagtcccccttagagggtcatagaa 400
Query: 544 atattaaaaaccaaagtattttgctaagaactccaattacgcctgaaggcttacatcagg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 atattaaaaaccaaagtattttgctaagaactccaattacgcctgaaggcttacatcagg 340
Query: 604 gtttataaaatgattggtcacatatataatgtactctaatgccattttattggctggctg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gtttataaaatgattggtcacatatataatgtactctaatgccattttattggctggctg 280
Query: 664 ttttcttcataaaag 678
|||||||||||||||
Sbjct: 279 ttttcttcataaaag 265
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1079
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1069
Effective search space: 714092
Effective search space used: 714092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_d15.g1 MSMg01no516_d15.g1 CHROMAT_FILE:
MSMg01no516_d15.g1 PHD_FILE: MSMg01no516_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:52 2005
(670 letters)
>mm_chr14_122527320_122528389
Length = 1070
Score = 1278 bits (661), Expect = 0.0
Identities = 667/669 (99%)
Strand = Plus / Plus
Query: 1 agtgtgtctttatggggagcatcaagcaataattctttgttatgaatttgagagattatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgtgtctttatggggagcatcaagcaataattctttgttatgaatttgagagattatt 260
Query: 61 ttgatactgcattcatttgtagtggatgctgttgtcaggcatatctatgaaattagacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgatactgcattcatttgtagtggatgctgttgtcaggcatatctatgaaattagacag 320
Query: 121 acaacttaaatattaacgtgtctgtttacttagtgctggcctttaggaagtggaaagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaacttaaatattaacgtgtctgtttacttagtgctggcctttaggaagtggaaagagc 380
Query: 181 ctggtggatgtgactcaggcctttaatcccagcagaggcaggcaaacaggcagatctctg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggtggatgtggctcaggcctttaatcccagcagaggcaggcaaacaggcagatctctg 440
Query: 241 cttcagggtcttacactgccagagacagacagcctttggtacaatagtaaactggaaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttcagggtcttacactgccagagacagacagcctttggtacaatagtaaactggaaaac 500
Query: 301 caaaacaaaacaaataaagcaaaacagaacaaacagttgctatctgtagaaggagccaat 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaaccaaaacaaataaagcaaaacagaacaaacagttgctatctgtagaaggagccaat 560
Query: 361 tcttgacatttctaaatgttcgtaggacccttgcttgggtcctgggaatcctagatttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttgacatttctaaatgttcgtaggacccttgcttgggtcctgggaatcctagatttaa 620
Query: 421 tctcttgccctgggagctgaggtaaagtagagcagaagtattcttaaatagagaaaggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctcttgccctgggagctgaggtaaagtagagcagaagtattcttaaatagagaaaggtg 680
Query: 481 tgcacccaacatttttcacattctacagaaacttagggtcaagatctgtgttaaacagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgcacccaacatttttcacattctacagaaacttagggtcaagatctgtgttaaacagaa 740
Query: 541 catagtgacacatatgtctgtggagatgctaagggcaggcccaggttatcctggctacct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 catagtgacacatatgtctgtggagatgctaagggcaggcccaggttatcctggctacct 800
Query: 601 agcaagatcctgtcctccaaaccaaaaagtgttaagttcttcgattcccaatttaaagag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agcaagatcctgtcctccaaaccaaaaagtgttaagttcttcgattcccaatttaaagag 860
Query: 661 attcttgaa 669
|||||||||
Sbjct: 861 attcttgaa 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
