XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAT
ATATATATATATAAAATTCAAAAAGATTAACAGTTCTTGTGACGCTTGAT
ATTTGAAATTAAATCTGTTAAATACTTAAGAGTTTATGCTCATTACTCTT
AAATATTATAGTCGTTCTTAGAATTTAGAAATCACTAGGTCCTAACTTTA
ATGCATTTACAAAGAAGACATTCACAGTTAAAATATTTTGATAGTTTTAT
TTGTTTTGTAATTTGGTGTGTTTTACACGAGCTGTTAGAAATAGTTCTCT
CAAAGCGGTTCACAGATGTCACTAAATTGTGAGTGGAATCCACATTACAA
AAAAAACCCTTGAAGAAGCTCTCAATGTATGCTGTTATTAAAGCTCTAAG
TGAATGCGAGAATTAGGGAGATCTTGTTGACCTGAAACCTGATACACATA
TTTTGATAAAACAAAGAAGCTAGGCTAAGATAGATAGCTCATCTGTAGCT
AGGGGAATGGGGCATGTGGTAGACCAAGCAAGAACTCAGTATAAACCTCA
AAACTAGCTGTTCTAACTGGACCCTAGTTTAGTCCCCAGCGCGCGCGCGT
GTGCGCGCGCACACACACACACACACACACGAGGCAGCTCACAAATGTTT
GTAACTCCAACTCTGGGGGATCTGACACACTCACACAGAGAAAGATGCAA
GCAAAACACCAGGGCTCCTATAATAAAAATAAATAAATC

ACTCCAAAAAAAAAACTCATAACAAAAAACACAACAAATCACCTACACAC
AAAAGGGAACCTTATTAATAATAGATGTCGTAGGGAGACTGTGATGGTGG
GGATAGGGAGTAAGGTGGGATAGGGAGGAGTGGTGCGAAGGGGAGAAGAA
ACAAAGGGAAAGGTCGTAGGTGGGAATAAGGTCCCCCGCTTGCTTAGTCC
CACCATTTCCCTAGGTTTATAAACAGACGGGCCCGGAGCACTGTTAGAGG
AAGAACAAGCCAGTATAGGTTAAAAAATAGGAGTATATAGAGGGCGACGG
GGCGCGGGAAGGGCGGGACCAAATAAGAAAATAGCATGATCTGAGAGGGT
ATCCTAAGAGCTGCCCGCGAACGGTGCAGAGTTCACGGGGCCACGGAGCG
TCGGTAGTGCGTCTGAGCCTCAATACCCCTCATAATAAACACCCATCTCC
CATTTTTTTTAATAGAAGAGAGAATATACAGATCACAAACACATAAATCG
GCGAATACTAACAATATTCCCCACGCGCGTTTTTGACATCNNCTCATTTC
CCCAGGCGNNNNNCCGTGATGACCATGTTAGAAATTAGAATCATNAAGCN
AACCCGNTCTCTGGTNNCGTTNCGNCAANNGTGNGANNGGTCNNNATCGT
CCATNCGNNANGTTGAGTTCCGTTTTGNNNANTTNCTNANNNNTCNTAGN
NNCNNTGNNNCTGNTGCNNTNGAANNNNNNGCNGCNGTTGCGCNNCGTAN
NGTCTGAGCGTAANGNGTTTGNNNNGGACGNNNNNNTGNGTCCNGGTNCN
NNGNNNNANGTCNNNAGTCTTAANCGNCANATNNNNGNNNATNCNAATNN
NANGGNTNNNNANGCNTNNNGNNGANNNGCNNNTNCGAANNNNNNTNNNN
NCTGTNATTAAAACTNNACTGANNNNNCNNAANNNNNNNTNNTNCGTCNN
NANNNANNNTNNTCNTACGGTCGG

Query= MSMg01no517_a02.b1 MSMg01no517_a02.b1 CHROMAT_FILE:
MSMg01no517_a02.b1 PHD_FILE: MSMg01no517_a02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:57 2005
         (671 letters)



>mm_chr14_99522427_99523497
          Length = 1071

 Score = 1284 bits (664), Expect = 0.0
 Identities = 667/668 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcatatatatatatataaaattcaaaaagattaacagttcttgtgacgcttgata 63
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 204 ggaattcatatatatatatataaaattcaaaaagattaacagttcttgtgactcttgata 263

                                                                       
Query: 64  tttgaaattaaatctgttaaatacttaagagtttatgctcattactcttaaatattatag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttgaaattaaatctgttaaatacttaagagtttatgctcattactcttaaatattatag 323

                                                                       
Query: 124 tcgttcttagaatttagaaatcactaggtcctaactttaatgcatttacaaagaagacat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcgttcttagaatttagaaatcactaggtcctaactttaatgcatttacaaagaagacat 383

                                                                       
Query: 184 tcacagttaaaatattttgatagttttatttgttttgtaatttggtgtgttttacacgag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcacagttaaaatattttgatagttttatttgttttgtaatttggtgtgttttacacgag 443

                                                                       
Query: 244 ctgttagaaatagttctctcaaagcggttcacagatgtcactaaattgtgagtggaatcc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgttagaaatagttctctcaaagcggttcacagatgtcactaaattgtgagtggaatcc 503

                                                                       
Query: 304 acattacaaaaaaaacccttgaagaagctctcaatgtatgctgttattaaagctctaagt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acattacaaaaaaaacccttgaagaagctctcaatgtatgctgttattaaagctctaagt 563

                                                                       
Query: 364 gaatgcgagaattagggagatcttgttgacctgaaacctgatacacatattttgataaaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaatgcgagaattagggagatcttgttgacctgaaacctgatacacatattttgataaaa 623

                                                                       
Query: 424 caaagaagctaggctaagatagatagctcatctgtagctaggggaatggggcatgtggta 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caaagaagctaggctaagatagatagctcatctgtagctaggggaatggggcatgtggta 683

                                                                       
Query: 484 gaccaagcaagaactcagtataaacctcaaaactagctgttctaactggaccctagttta 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaccaagcaagaactcagtataaacctcaaaactagctgttctaactggaccctagttta 743

                                                                       
Query: 544 gtccccagcgcgcgcgcgtgtgcgcgcgcacacacacacacacacacacgaggcagctca 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gtccccagcgcgcgcgcgtgtgcgcgcgcacacacacacacacacacacgaggcagctca 803

                                                                       
Query: 604 caaatgtttgtaactccaactctgggggatctgacacactcacacagagaaagatgcaag 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 caaatgtttgtaactccaactctgggggatctgacacactcacacagagaaagatgcaag 863

                   
Query: 664 caaaacac 671
           ||||||||
Sbjct: 864 caaaacac 871


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space:   701321
Effective search space used:   701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)