Query= MSMg01no517_a07.b1 MSMg01no517_a07.b1 CHROMAT_FILE:
MSMg01no517_a07.b1 PHD_FILE: MSMg01no517_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:58 2005
(581 letters)
>mm_chr14_102448400_102449379
Length = 980
Score = 1093 bits (565), Expect = 0.0
Identities = 577/581 (99%), Gaps = 1/581 (0%)
Strand = Plus / Minus
Query: 1 aaaaagaagtcaaatactacagactttcctgcatcccaagtcatcttgatttagtgaaga 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 780 aaaaagaagtcaaatactacagactttcctgcatcccaagtcatcttgatgtagtgaaga 721
Query: 61 gaggcatatagaaaactattatttatctcacagtgaatattgtgctattaatttagctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gaggcatatagaaaactattatttatctcacagtgaatattgtgctattaatttagctct 661
Query: 121 gtgggatttggtacatttaacacaaatagggtgggggggaaccccacatcatctgagact 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 660 gtgggatttggtacatttaacacaaatagggt-ggggggaaccccacatcatctgagact 602
Query: 181 aacaatctgaagttcagagtagcataagtgtcatcacctgctggtcaaagctgggtgcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aacaatctgaagttcagagtagcataagtgtcatcacctgctggtcaaagctgggtgcaa 542
Query: 241 tctcaaatccctttggactcaggagggacaggatcacctcactgcctctgcaccccactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctcaaatccctttggactcaggagggacaggatcacctcactgcctctgcaccccactc 482
Query: 301 tctttcacccaatacaggattttgttcttttgaactcatcaagccctggactcagggtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctttcacccaatacaggattttgttcttttgaactcatcaagccctggactcagggtgc 422
Query: 361 ttgacacatcacccatctggctaagttattcaatgacaccatcacatgtggcatatctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgacacatcacccatctggctaagttattcaatgacaccatcacatgtggcatatctat 362
Query: 421 tgctggtcagtgcaggttccactccagaaaatcctaagtagaattcctcattgtcttcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgctggtcagtgcaggttccactccagaaaatcctaagtagaattcctcattgtcttcca 302
Query: 481 tcatttggcctgcttgcctcttttaattagtaattatgtatttttcaattcactctcaat 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 301 tcatttggcctgcttgcctcttttaattaataattatgtatttttcaattcactctcaat 242
Query: 541 gtttcattgttcctgtcagaacaaaacaacaaggatcttgt 581
||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atttcattgttcctgtcagaacaaaacaacaaggatcttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 980
Length adjustment: 10
Effective length of query: 571
Effective length of database: 970
Effective search space: 553870
Effective search space used: 553870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_a07.g1 MSMg01no517_a07.g1 CHROMAT_FILE:
MSMg01no517_a07.g1 PHD_FILE: MSMg01no517_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:58 2005
(621 letters)
>mm_chr14_102305262_102306282
Length = 1021
Score = 1123 bits (581), Expect = 0.0
Identities = 608/617 (98%)
Strand = Plus / Plus
Query: 1 aaccaagctggcactagggagctattggcattgtgaaatttggatgtagaataatcagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaccaagctggcactagggagctattggcattgtgaaatttggatgtagaataatcagta 260
Query: 61 tgttctataagtagatttctgacagctgtggggaagagggggtggggctggagatacaag 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 tgttctataagtagatttctgacagctgtggggaagaggggatggggctggagatacaag 320
Query: 121 agaaaaacaggaggtgataagaggagagaggggaaatatgcctctgaactctggtgggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaaaacaggaggtgataagaggagagaggggaaatatgcctctgaactctggtgggga 380
Query: 181 catacagaagggtgaagaatctgggttcattcaaggttgctctataaacttgagagcaca 240
||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||
Sbjct: 381 catacagaagggtgaagaagctgggttcattcaaggttggtctataaacttgggagcaca 440
Query: 241 ttattacaagggtgagcaaggcagcagaagggaaagaaaacagagaggggcatttctgac 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 ttattacaagggtgagcaaggcagcagaaggggaagaaaacagagaggggcatttctgac 500
Query: 301 tctcacagtggttggatagtgacacatgtaaccaagttatgaaaatccacaggaactaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctcacagtggttggatagtgacacatgtaaccaagttatgaaaatccacaggaactaga 560
Query: 361 acatgtcttggcggaagatgctttaattttgagaacattggacctagtcatttaagacgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acatgtcttggcggaagatgctttaattttgagaacattggacctagtcatttaagacgt 620
Query: 421 gttagtgagtgcaagttatttaggcaagccatggtcagaaaggttatgactgaggaagtc 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttagtgaatgcaagttatttaggcaagccatggtcagaaaggttatgactgaggaagtc 680
Query: 481 caagatgagagaggaggagaacagcacactgataagactaagatgaaggtagagagactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caagatgagagaggaggagaacagcacactgataagactaagatgaaggtagagagactg 740
Query: 541 tgagggttgggcaaggtggagagggacatcaggtgacttagaaaagtgttccccactggt 600
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 741 tgagggttgggcaaggtggatagggacatcaggtgacttagaagagtgttccccactggt 800
Query: 601 aaggaccttgtaggctg 617
|||||||| ||||||||
Sbjct: 801 aaggacctggtaggctg 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
