Query= MSMg01no517_g23.b1 MSMg01no517_g23.b1 CHROMAT_FILE:
MSMg01no517_g23.b1 PHD_FILE: MSMg01no517_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:31 2005
(491 letters)
>mm_chr14_54929084_54929974
Length = 891
Score = 932 bits (482), Expect = 0.0
Identities = 488/492 (99%), Gaps = 4/492 (0%)
Strand = Plus / Minus
Query: 4 ggaattctaagtgtactgataaggaatactgagacattcaataatcaaagtggctcatca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ggaattctaagtgtactgataaggaatactgagacattcaataatcaaagtggctcatca 608
Query: 64 aagaaaggccaaggatccctgcccaagtgatctacaaactccatgcaccttgctttagga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aagaaaggccaaggatccctgcccaagtgatctacaaactccatgcaccttgctttagga 548
Query: 124 caccaatgagaataatattcttcacagaaacagaaatatacacaaatgttcatatgggac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 caccaatgagaataatattcttcacagaaacagaaatatacacaaatgttcatatgggac 488
Query: 184 cagtggcatcaaggtgatatattctagggctacagaaacaggttttcatctgctgactta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cagtggcatcaaggtgatatattctagggctacagaaacaggttttcatctgctgactta 428
Query: 244 aaaaaatcaggaaaggcaaagttttatcgttcagccaagtgtcat----acacacacaca 299
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 427 aaaaaatcaggaaaggcaaagttttatcgttcagccaagtgtcatacacacacacacaca 368
Query: 300 cacacacacacacacacacacacacacacacacacagagtatttgaaagtctctaggaac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cacacacacacacacacacacacacacacacacacagagtatttgaaagtctctaggaac 308
Query: 360 agttgcctctggcaggaaaaaagcctttggctttaagaaggagaagaattaagatattag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agttgcctctggcaggaaaaaagcctttggctttaagaaggagaagaattaagatattag 248
Query: 420 ccactttaaatgttaaaagtacattaatccacctgtatactcttttctgtacaatggaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ccactttaaatgttaaaagtacattaatccacctgtatactcttttctgtacaatggaaa 188
Query: 480 agtctgactcct 491
||||||||||||
Sbjct: 187 agtctgactcct 176
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 22
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_g23.g1 MSMg01no517_g23.g1 CHROMAT_FILE:
MSMg01no517_g23.g1 PHD_FILE: MSMg01no517_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:31 2005
(494 letters)
>mm_chr14_54762459_54763352
Length = 894
Score = 955 bits (494), Expect = 0.0
Identities = 494/494 (100%)
Strand = Plus / Plus
Query: 1 ccctgctatagtcatctcccccagcgggaagtacagtgctgtcaagcttggtcagtatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctgctatagtcatctcccccagcgggaagtacagtgctgtcaagcttggtcagtatgg 260
Query: 61 agattcgaattcagtgacatgttcagttcagcacaacagtgaaactgtgcactcgactga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agattcgaattcagtgacatgttcagttcagcacaacagtgaaactgtgcactcgactga 320
Query: 121 ctttgaaccatatgcaaattctttcagtaagtatctagcttaaagccggtcggtggtggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttgaaccatatgcaaattctttcagtaagtatctagcttaaagccggtcggtggtggc 380
Query: 181 gcacgcctttaatcccagcacttgggaggcagaggcaggtagatttctgagttcgaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcacgcctttaatcccagcacttgggaggcagaggcaggtagatttctgagttcgaggcc 440
Query: 241 agcctggtctacagagtgagttccagaacagccagggctatacaaagaaactctgtctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcctggtctacagagtgagttccagaacagccagggctatacaaagaaactctgtctta 500
Query: 301 aataaaaaagtatctagcttaaagacctgaagctaagatgggcaagccagaggaaagaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataaaaaagtatctagcttaaagacctgaagctaagatgggcaagccagaggaaagaga 560
Query: 361 agtgagcaatatgaactcggggtggataacttttggtttagcattgtgctagtaaataat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtgagcaatatgaactcggggtggataacttttggtttagcattgtgctagtaaataat 620
Query: 421 aataataattattaataatgatgtgaaatgctttgcatctctcctcttttttaatcccca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aataataattattaataatgatgtgaaatgctttgcatctctcctcttttttaatcccca 680
Query: 481 cctctcatcttcac 494
||||||||||||||
Sbjct: 681 cctctcatcttcac 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
