Query= MSMg01no517_i10.b1 MSMg01no517_i10.b1 CHROMAT_FILE:
MSMg01no517_i10.b1 PHD_FILE: MSMg01no517_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:38 2005
(651 letters)
>mm_chr14_80632686_80633737
Length = 1052
Score = 1174 bits (607), Expect = 0.0
Identities = 637/647 (98%), Gaps = 1/647 (0%)
Strand = Plus / Minus
Query: 5 gaattcactaagtcttgctagttccccacatgctggtcctcagacagaggcccagggttg 64
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gaattcagtaagccttgctagttccccacatgctggtcctcagacagaggcccagggttg 792
Query: 65 ggggacaataattgattccaggcaaataggtccacagtgtgttaacttggcgtacagaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ggggacaataattgattccaggcaaataggtccacagtgtgttaacttggcgtacagaca 732
Query: 125 caatctcaggaatcagaagaatggatggcctccatgcctatcagctactctcgagacggt 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 731 caatctcaggaatcagaagaatggatgacctccatgcctatcagctactctcgagacggt 672
Query: 185 aaaagtggaaagattgcaatgcataatccagcttgtcag-aggattatagatgtgtgcca 243
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 671 aaaagtggaaagattgcaatgcataatccagcttgtcagaaggattatagatgtgtgcca 612
Query: 244 atgcttgatggtgtgtttgttgtcttctttatcaaagaaaactcaagacgggttgaaagc 303
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 611 atgcttgatggtgtgtttgttgtcttctttatcaaagaaaaatcaagacgggttgaaagc 552
Query: 304 cacagatatagccccagtcactagaagcttgaagtaaaggttgatcccctttcaatatgt 363
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 551 cacagatatagccccagtcactagaagcttgaagtaaaggttggtcccctttcaatatgt 492
Query: 364 gcagacaagagagaatttggatagctcctcactcgatcccatcggaagcataaagagaaa 423
|||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 491 gcagacaacagagaattcggatagctcctcactcgatcccatgggaagcataaagagaaa 432
Query: 424 aagaaacaaaagcatgtggaacaaagccatggtatacctctccaatcccaaacctcccaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aagaaacaaaagcatgtggaacaaagccatggtatacctctccaatcccaaacctcccaa 372
Query: 484 gcccttttccatcagtgacagaaaaaatccatctctttgccacctgctgggggctgtcat 543
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 371 gcccttttccatcagtgacagagaaaatccatctctttgccacctgctgggggctgtcat 312
Query: 544 ttgatgggcactcaccaagcagagagcagatggttacagaaagatgccttttgacacaca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttgatgggcactcaccaagcagagagcagatggttacagaaagatgccttttgacacaca 252
Query: 604 gctgggtctccatctgtcccttgactgggatgtctcctttccttctg 650
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gctgggtctccatctgtcccttgactgggatgtctcctttccttctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space: 667922
Effective search space used: 667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_i10.g1 MSMg01no517_i10.g1 CHROMAT_FILE:
MSMg01no517_i10.g1 PHD_FILE: MSMg01no517_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:39 2005
(628 letters)
>mm_chr14_80464427_80465454
Length = 1028
Score = 1183 bits (612), Expect = 0.0
Identities = 624/628 (99%)
Strand = Plus / Plus
Query: 1 tatgaaatggagtgcttctagagtggagtctccactgctgtccatcagtgtccctcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgaaatggagtgcttctagagtggagtctccactgctgtccatcagtgtccctcttcc 260
Query: 61 tgggatgcttttccactacagcattcccatgcactcccttggtccttcatgcctgaccca 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 tgggatgcttttccactacagcattcccatgcactcccttggcccttcatgcctgaccca 320
Query: 121 ttgtggatccaatgctgagctggacacagaacaggccggtaagtaggtctaatgactgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 ttgtggatccaatgctgagctggacacagaacaggccggtaagtaggtctaataactgag 380
Query: 181 aaatcctttcacttgcccattgatgccttttggaggacagaaagtaatgatgggagagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatcctttcacttgcccattgatgccttttggaggacagaaagtaatgatgggagagaa 440
Query: 241 gagcagcaacataagtactttcgtattggaactgaaaggggataaagaggggatctccat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagcagcaacataagtactttcgtattggaactgaaaggggataaagaggggatctccat 500
Query: 301 ccactggaaggcatgaggttatattgctggtaggaggagtagaggtagatattaaacttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccactggaaggcatgaggttatattgctggtaggaggagtagaggtagatattaaacttt 560
Query: 361 tattcagatgtgaggttactatgggagaggacagaggggacaggaatataaacactccat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattcagatgtgaggttactatgggagaggacagaggggacaggaatataaacactccat 620
Query: 421 gttaagtctcccacaatgctgctctcctttttaaagtatacaccagagcctctagggtct 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 gttaagtctcccacaatgctgctctcctttttaaagtacacaccagagcctctagggtct 680
Query: 481 ggtattagaagaggtcaattaggcagggaaggccactggcctacaatagagatctggctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggtattagaagaggtcaattaggcagggaaggccactggcctacaatagagatctggctt 740
Query: 541 tggcaggaggaagtgtaaaatgaagagaaatgaacagaataagcagggaattgtaactga 600
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggcaggaggaagtgtaaaatggagagaaatgaacagaataagcagggaattgtaactga 800
Query: 601 gtagcagggaaagaatcagtataatttc 628
||||||||||||||||||||||||||||
Sbjct: 801 gtagcagggaaagaatcagtataatttc 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
