Query= MSMg01no517_l19.b1 MSMg01no517_l19.b1 CHROMAT_FILE:
MSMg01no517_l19.b1 PHD_FILE: MSMg01no517_l19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:55 2005
(691 letters)
>mm_chr14_110714168_110715252
Length = 1085
Score = 1251 bits (647), Expect = 0.0
Identities = 675/687 (98%), Gaps = 6/687 (0%)
Strand = Plus / Plus
Query: 5 gaattcattaaacaatgacatttaaaacagtttttcagtatgaaacaatttaatgacact 64
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattaaacaatgacatttaaaa--gtttttcagtatgaaacaatttaatgacact 262
Query: 65 attaatactgaatgaagtttttgctcaaatcacttccctgtttcctaattactctgacca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 attaatactgaatgaagtttttgctcaaatcacttccctgtttcctaattactctgacca 322
Query: 125 tttaaatcatttagttacaatagaactggaactaaaaagtaaagaaataaaattaatgtc 184
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 323 tttaaatcatttagttacaatagaactggagctaaaaagtaaagaaataaaattaatgtc 382
Query: 185 aagacagtaatcagcatgagaggatcgattgctgttaacattaataaaactgcaatgatt 244
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aagacagtaatcaggatgagaggatcgattgctgttaacattaataaaactgcaatgatt 442
Query: 245 aactcactgtttataaaaagaggaatatttactctctaaaattatatttgaaaataaagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aactcactgtttataaaaagaggaatatttactctctaaaattatatttgaaaataaagc 502
Query: 305 attctgtaatttcataatgaattgcaatctaaaccttttcaagttttagtagttccaaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 attctgtaatttcataatgaattgcaatctaaaccttttcaagttttagtagttccaaag 562
Query: 365 gaattgtggggacaccatcactttttgtaattttcattcagatacataaaatacaggttg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gaattgtggggacaccatcactttttgtaattttcattcagatacataaaatacaggttg 622
Query: 425 ttattttaatttttttctctttagtactttgtagttaactacagggaaactatatgataa 484
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttattttaattttcttctctttagtactttgtagttaactacagggaaactatatgataa 682
Query: 485 atcttcaacttaataaagtcagaaaacaaaatccaatgaaatttagaaaacacacacaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 atcttcaacttaataaagtcagaaaacaaaatccaatgaaatttagaaaacacacacaca 742
Query: 545 cacacacatacttgatcatagaacaaaattctggaatgtaagtccatgaataaaaataat 604
|||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 743 caca----tacttgatcatagaactaaattctggaatgtaagtccatgaataaaaataat 798
Query: 605 aaagtatcacatttagtttatagaaaaataaagtatgtataaaattttttgtgcagtgta 664
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 799 aaagtatcacatttagtttatagaaaaataaagtatgtataaaaatttttgtgcagtgta 858
Query: 665 ctgacttcgtttttcctacataatatt 691
||||||| |||||||||||||||||||
Sbjct: 859 ctgactttgtttttcctacataatatt 885
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1085
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1075
Effective search space: 732075
Effective search space used: 732075
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_l19.g1 MSMg01no517_l19.g1 CHROMAT_FILE:
MSMg01no517_l19.g1 PHD_FILE: MSMg01no517_l19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:55 2005
(669 letters)
>mm_chr14_110831896_110832967
Length = 1072
Score = 1060 bits (548), Expect = 0.0
Identities = 646/690 (93%), Gaps = 23/690 (3%)
Strand = Plus / Minus
Query: 1 taataaaataacctgaaaaattctaaagccttaagaaaaactaaaatattaaaactgcct 60
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 735 taataaaatatcctgaaaaattctaaagccttaagaaaaactaaaatattcaaactgcct 676
Query: 61 cagagtataagtctggagaaaatactttatttttatacgagt---------------tta 105
|||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 675 cagagtataagtctggagaaaatactttatttttatacgagtgattacttcaagagatta 616
Query: 106 tattaaactatttaggtgaaaatctcagacttgtttgatatggtgaatattaaagagaga 165
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 615 tattaaactatttaggtgaaaatctcagacttgtttgatatggtgaatatt-aagagaga 557
Query: 166 aattaaataatatcctattttctaacattctttcattattgtagagaag----tatattg 221
|||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 556 aattaaataataccctattttctaacattctttcattattgtatagaagtaattatattg 497
Query: 222 taaatataaaaaactgctaaatagtaaataagctttattctgatttcataatcataattt 281
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 496 taaatataaaaaactgctaaatagtaaataagctttattctgatttcataatcatacttt 437
Query: 282 ttagcagaaaagactagaaatttcattgtcacttggaataatttaaatgacaggaggaaa 341
||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||| ||
Sbjct: 436 ttagcagaaaagactagaaatctcattgtaactttgaataatttaaatgacaggagg-aa 378
Query: 342 aaaatgattaaattgacagcataaaaat-caaaataatgaatttgaaaatacattagccc 400
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 377 aaaatgattaaattgacagcataaaaataaaaaataatgaatttgaaaatacattagcct 318
Query: 401 atgtatcccattattcaaaatataatgaacagggtggattttagatagatgaaa-ttatt 459
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 317 atgtatcccattattcaaaatataatgaacagggtggattttacatagatgaaatttatt 258
Query: 460 tccaattgattgggaagtaaaataatctaaaaccaaagatctagcagtaaggataaagat 519
||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 257 tccaattgactgggaagtaagataatccaaaaccaaagatctagcagtaaggataaagat 198
Query: 520 atttttcctagttcatagactaagccttctccctgggccatcaagtgatgcaacgggacc 579
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 197 atttttcctagttcatagactaagccttctccctgggccatcaagtgatgcaaagggacc 138
Query: 580 cttttgtatgatcacaagtcttattctgaggactactggccccttccaggccttatctaa 639
| |||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 137 cgtttgtatgatcacaagtcatattctgaggactaatggccccttccaggccatatctaa 78
Query: 640 aatggtttaatatgggcaacacaatccctg 669
|||| |||||||||||||| ||||||||||
Sbjct: 77 aatgatttaatatgggcaatacaatccctg 48
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1072
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1062
Effective search space: 699858
Effective search space used: 699858
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
