Query= MSMg01no517_o24.b1 MSMg01no517_o24.b1 CHROMAT_FILE:
MSMg01no517_o24.b1 PHD_FILE: MSMg01no517_o24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:11 2005
(496 letters)
>mm_chr14_76518677_76519575
Length = 899
Score = 897 bits (464), Expect = 0.0
Identities = 487/496 (98%), Gaps = 5/496 (1%)
Strand = Plus / Plus
Query: 5 tggtggcaattgcttttatcctctgagccatccagttgactcactgctgtggtttttaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tggtggcaattgcttttatcctctgagccatccagttgactcactgctgtggtttttaat 264
Query: 65 aacagattgttatcactagacaatcaatttaaaagcctgcattcttaagtggcttttctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacagattgttatcactagacaatcaatttaaaagcctgcattcttaagtggcttttctc 324
Query: 125 tctatgaaggtgaactttgcccccttgtggaccatacagcaagtgactcaaggaaaaaca 184
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgtgaaggtgaactttgcccccttgtggaccatacagcaagtgactcaaggaaaaaca 384
Query: 185 gtctc---tggaagca-gtgattgtcaagtgctaacaggaaatcttagaccatttgttaa 240
||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtctctggtggaag-aggtgattgtcaagtgctaacaggaaatcttagaccatttgttaa 443
Query: 241 tggaaaccgtgtcttttactagtttcttggtaatatttatcttgaaggttagaggtaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tggaaaccgtgtcttttactagtttcttggtaatatttatcttgaaggttagaggtaaag 503
Query: 301 atttttaacttattgtacatctgtgtctatatatgtgtatatacatgggtatgtgcatgc 360
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 504 atttttaacttattgtacatctgtgtctatatatgtgtatgtacgtgggtatgtgcatgc 563
Query: 361 caaggcaagtgtatgaatccaggtcaaaggacaatttagaagttgattttgtttttccac 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 564 caaggcaagtgtatgaatccaggtcaaaggacaacttagaagttgattttgtttttccac 623
Query: 421 cgagtgtgttgcaggaattgagctcaggtcatgagacccagccacaggtactgttatcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cgagtgtgttgcaggaattgagctcaggtcatgagacccagccacaggtactgttatcag 683
Query: 481 ctgagtcttctcataa 496
||||||||||||||||
Sbjct: 684 ctgagtcttctcataa 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 899
Length adjustment: 10
Effective length of query: 486
Effective length of database: 889
Effective search space: 432054
Effective search space used: 432054
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_o24.g1 MSMg01no517_o24.g1 CHROMAT_FILE:
MSMg01no517_o24.g1 PHD_FILE: MSMg01no517_o24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:12 2005
(528 letters)
>mm_chr14_76669324_76670251
Length = 928
Score = 990 bits (512), Expect = 0.0
Identities = 524/528 (99%)
Strand = Plus / Minus
Query: 1 tctgagactgggttacagacagttttgtgagcctgtgtgtggattttgggaatcaaacct 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 721 tctgagactgggttacagacagttttgtgagcctgtgtgtggatttggggaatcaaacct 662
Query: 61 gtgtcctctggaagagcggccagtgctctttaccacggagctctttccagcctcatccct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 661 gtgtcctctggaagagcggccagtgctctttaccacggagctctttccagccccatccct 602
Query: 121 taattatctagacggtgaataattgcgtataagtgaagtctcggagttcacttttgggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taattatctagacggtgaataattgcgtataagtgaagtctcggagttcacttttgggtt 542
Query: 181 ttagaacacttgacaaaaattttatatttcccatcacggatgctggaatttgagatgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttagaacacttgacaaaaattttatatttcccatcacggatgctggaatttgagatgtat 482
Query: 241 tcagccagcagacaagcttggctaagcatgttcctaaggactggtgaatgaaacagggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcagccagcagacaagcttggctaagcatgttcctaaggactggtgaatgaaacagggtt 422
Query: 301 acagagcatacagcagaactccactggccacttggatgggcgctgtggagacgaattgtc 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acagagcatacagcagaattccactggccacttggatgggcgctgtggagacgaattgtc 362
Query: 361 caacagttcgtcctgtacagtcagcgttcctctaatccctgcaaagagcccagcagtgtg 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caacagtgcgtcctgtacagtcagcgttcctctaatccctgcaaagagcccagcagtgtg 302
Query: 421 ctaagcaaatcgcaactattcatttgctcaatcctcatctccaccctataaagtgggtgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctaagcaaatcgcaactattcatttgctcaatcctcatctccaccctataaagtgggtgc 242
Query: 481 tgctatcatgcttacaatggcgatcatactctaccacacttactgagc 528
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgctatcatgcttacaatggcgatcatactctaccacacttactgagc 194
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
