TCAACCCTATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCACTCAACAAGCTAAATGTGTACATTAGAGCCAATTGTTAA
AAGTGATTAGCATGTAATTGTCCTGTGTAAAAATCTAAAACACAAGTGCC
CCTAAGTTTCATTGAGAGCTAAATACAATAATAAATATCTCACAGGCTTG
CTGAAAGCCTGATGAAACATTCCCCTCTCAGACTCAGGCAACACCATGAT
AGATGATAGAGGTGACCTCTGAGACTTCCCTCTTAATAAGGAGCTGCTCA
GGGAGGAAGAATCATTCTTTATTGAGGGTGTGGTAAGGAGTAGGTCTCTG
TGCTCCAGTGAATGCCCACATCTGTGCACATATGGGCAGCACTAATTGGA
CTTAGTGTGTTATCAAAAAAAAAAAAAGTTGAAAGGGGATATGTGGGGGA
TAACAAGGAGCATTGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTTCCCTCCCTCCCTCCCTCCCTCCCCTTCCTCCGCCCCTCCCCT
CCTCCCTCCCTCCCTTCCTTCTTTGCCTCTCTTTTTCCTTTCCTCTCCTT
TTTGCTCCTCCTCTTCTTTTTTTTTTATTCCCTTCCTCCTCTCCCCTCCT
TTTTTTTGCCTTTCCCTTCTTCCCNCTGTTTTTTCGCTCTGCCCTTTTTT
GTCTCTTTTCTTCTCCCCCTTTTTTTATTCTGCCTTTCTTTTTTCTA

TTTTCCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGGTTTCTCCATATATGGTA
ATTGAGAGTTTGGCCGGGTATAGTAGCCTGCGCTGGCATTTGTGTTCTCT
TAGTGTCTGTATAACATCTGTCCAGGCTCTTCTGGCTTTCATAGTCTCTG
GTGAAAAGTCTGGTGTAATTCTGATAGGCCTTCCTTTATATGTCACTTGA
CCTTTCTCCCTTACTGCTTTTAATATTCTATCTTTATTTAGTGCATTTGT
TGTTCTGATTATTATGTGTCGGGAGGAATTTCTTTTCTGGTCCAGTCTAT
TTGAAGTTCTGTAGGCTTCTTGTATGGTCATGGGCATCTCTTTCTTTATG
TTTGGGAAGTTTTCTTCTATTATTTTGTTGAAGATATTAGTTGGCCCTTT
AAGTTGAAAATCTTCATTCTCATCAATTCCTATTATCCGTAGGTTTGGTC
TTCTCATTGTGTCCTGGATTTCCTGGATGTTTTGAGTTAGGATCCTTTTG
CATTTTGTATTTTCTTTGACTGTTGTGTCGATGTTCTCTATGGAATCTTC
TGCACGTGAGATTCTCTCTTCCATTTCTTGTATTCTGTTGCTGATGCTCG
CATCTATGGTTCCAGATCTCTTTCCTAGGATTTCTATCTCCAGCGTTGCC
TCGCTTTGGGTTTTCTTTACTGTGTCTACTTCCCTTTTTAGTTCTAGTAT
GGG

Query= MSMg01no518_e24.b1 MSMg01no518_e24.b1 CHROMAT_FILE:
MSMg01no518_e24.b1 PHD_FILE: MSMg01no518_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:40 2005
         (495 letters)



>mm_chr14_41480427_41481321
          Length = 895

 Score =  895 bits (463), Expect = 0.0
 Identities = 490/507 (96%), Gaps = 16/507 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactcaacaagctaaatgtgtacattagagccaattgttaaaagtgattagcatg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactcaacaagctaaatgtgtacattagagccaattgttaaaagtgattagcatg 264

                                                                       
Query: 65  taattgtcctgtgtaaaaatctaaaacacaagtgcccctaagtttcattgagagctaaat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taattgtcctgtgtaaaaatctaaaacacaagtgcccctaagtttcattgagagctaaat 324

                                                                       
Query: 125 acaataataaatatctcacaggcttgctgaaagcctgatgaaacattcccctctcagact 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acaataataaatatctcacaggcttgctgaaagcctgatgaaacattcccctctcagact 384

                                                                       
Query: 185 caggcaacaccatgatagatgatagaggtgacctctgagacttccctcttaataaggagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caggcaacaccatgatagatgatagaggtgacctctgagacttccctcttaataaggagc 444

                                                                       
Query: 245 tgctcagggaggaagaatcattctttattgagggtgtggtaaggagtaggtctctgtgct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgctcagggaggaagaatcattctttattgagggtgtggtaaggagtaggtctctgtgct 504

                                                                       
Query: 305 ccagtgaatgcccacatctgtgcacatatgggcagcactaattggacttagtgtgttatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccagtgaatgcccacatctgtgcacatatgggcagcactaattggacttagtgtgttatc 564

                                                                       
Query: 365 aaaaaaaaaaaaa-gttgaaaggggatatgtgggggataacaaggagcattggtctctct 423
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaaaaaaaaaaaaagttgaaaggggatatgtgggggataacaaggagcattggtctctct 624

                                                                       
Query: 424 ctctctctctctctctctctctctctctctctct---------tcc---ctccctccctc 471
           ||||||||||||||||||||||||||||||||||         |||   |||||||||||
Sbjct: 625 ctctctctctctctctctctctctctctctctctctctctctctcctctctccctccctc 684

                                      
Query: 472 cctccctccc---cttcctccgcccct 495
           ||||||||||   ||||||||| ||||
Sbjct: 685 cctccctccctcccttcctccgtccct 711


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space:   429225
Effective search space used:   429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)