Query= MSMg01no519_g06.b1 MSMg01no519_g06.b1 CHROMAT_FILE:
MSMg01no519_g06.b1 PHD_FILE: MSMg01no519_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:05 2005
(118 letters)
>mm_chr14_105824506_105825023
Length = 518
Score = 205 bits (106), Expect = 7e-58
Identities = 112/114 (98%)
Strand = Plus / Minus
Query: 5 gaattccactatcagcaacaacaaaaatgaaccaaaggcttaatagtgaatataatctcc 64
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 318 gaattccactaacagcaacaacaaaaatgaaccaaaggtttaatagtgaatataatctcc 259
Query: 65 caaaacacaactagccagaactcacattttaaaaatgtatttagccaaattatg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 caaaacacaactagccagaactcacattttaaaaatgtatttagccaaattatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 118
Length of database: 518
Length adjustment: 8
Effective length of query: 110
Effective length of database: 510
Effective search space: 56100
Effective search space used: 56100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no519_g06.g1 MSMg01no519_g06.g1 CHROMAT_FILE:
MSMg01no519_g06.g1 PHD_FILE: MSMg01no519_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:05 2005
(568 letters)
>mm_chr14_105675656_105676625
Length = 970
Score = 998 bits (516), Expect = 0.0
Identities = 557/574 (97%), Gaps = 8/574 (1%)
Strand = Plus / Plus
Query: 1 acagattcatattttattctatgagctataattgcatgcttactacttttacttagtgaa 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 199 acagattcatattttattctatgagctataattgcatacttactacttttacttagtgaa 258
Query: 61 atattcagatcattccaacttactcagcaggagcctcttttatcttttcctgtgtctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atattcagatcattccaacttactcagcaggagcctcttttatcttttcctgtgtctttg 318
Query: 121 tgacgtgttcatgatttggcactttgttaccatatgacatttaaataaggcaggggtttg 180
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 319 tgacatgttcatgatttggcactttgttaccatatgacatttaaataaggcgggggtttg 378
Query: 181 agttcttttttttttt--aattggatattttatttatttacatttcaaatatcccctttc 238
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 379 agttctttttttttttttaattggatattttatttatttacatttcaaatatcccctctc 438
Query: 239 ccaaaagtaaggaacacttggtggatttgtatgtcatccttgcgcaggggccatgccaat 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 439 ccaaaagtaaggaacacttggtggatttgtatgtcatccttgcgcaggggccatgctaat 498
Query: 299 cttcaccattattgttccaattttagtgtatgtgctgccgaagcgagcacgggtttgagt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cttcaccattattgttccaattttagtgtatgtgctgccgaagcgagcacgggtttgagt 558
Query: 359 tgttgactgaagtatgatggaaaggcagcctgcactcgtaggtaggacgtcggagagaac 418
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 559 tgttgactgtagtatgatggaaaggcagcctgcactcgtaggtaggacgtcggggagaac 618
Query: 419 cccctttcccccttgcttagtgagcatctctcctaggactgtgcacagagcatcatcctt 478
|| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 619 ccgctttcccccttgcttagtgagcatctttcctaggactg--cacagagcatcatcctt 676
Query: 479 ctgaggaagggccagtgtgagctcaaaactgcagacagaatgcctttcttatttttattt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ctgaggaagggccagtgtgagctcaaaactgcagacagaatgcctttcttatttttattt 736
Query: 539 t----gtcttttgttttgaggcaggatctttcta 568
| |||||||||||||||||||||||||||||
Sbjct: 737 tctttgtcttttgttttgaggcaggatctttcta 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 970
Length adjustment: 10
Effective length of query: 558
Effective length of database: 960
Effective search space: 535680
Effective search space used: 535680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
