Query= MSMg01no522_c24.b1 MSMg01no522_c24.b1 CHROMAT_FILE:
MSMg01no522_c24.b1 PHD_FILE: MSMg01no522_c24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:44 2005
(394 letters)
>mm_chr14_75203481_75204274
Length = 794
Score = 677 bits (350), Expect = 0.0
Identities = 388/418 (92%), Gaps = 28/418 (6%)
Strand = Plus / Minus
Query: 5 gaattccctgatccttcactcaagtacgttcaccttttataattcagtacattttctctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gaattccctgatccttcactcaagtacgttcaccttttataattcagtacattttctctt 651
Query: 65 tttaaaatgatgtgattgtgtttcaaaaatccactttgcctctcttttctgcccaccttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tttaaaatgatgtgattgtgtttcaaaaatccactttgcctctcttttctgcccaccttc 591
Query: 125 ctatagtggccagttgcagctggagacgtctccagaccgtgaggtaaggacagagctcgg 184
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ctacagtggccagttgcagctggagacgtctccagaccgtgaggtaaggacagagctcgg 531
Query: 185 tgttgccttgggggaggaaagtagt----------------------ggcatttgttcat 222
||||||||||||||||||||||||| |||||||||||||
Sbjct: 530 tgttgccttgggggaggaaagtagttgccttgggggaggaaagtagtggcatttgttcat 471
Query: 223 gaccgagtttgtaatctttcctgattctctaattttgttgactattgttccccccacctt 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gaccgagtttgtaatctttcctgattctctaattttgttgactattgttccccccacctt 411
Query: 283 ccctcaaagatgagaggtggcttaatttttttttttttttttttttttt------gggta 336
||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 410 ccctcaaagatgagaggtggcttaattttttttttttttttttttttttttttttggtta 351
Query: 337 gattctctaagtttgtttgccaaaacagactcactttgtcaggcagtggtcactgcag 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gattctctaagtttgtttgccaaaacagactcactttgtcaggcagtggtcactgcag 293
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_c24.g1 MSMg01no522_c24.g1 CHROMAT_FILE:
MSMg01no522_c24.g1 PHD_FILE: MSMg01no522_c24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:44 2005
(525 letters)
>mm_chr14_75031614_75032538
Length = 925
Score = 984 bits (509), Expect = 0.0
Identities = 521/525 (99%)
Strand = Plus / Plus
Query: 1 caacagcatccaaagatgtggggacaataatggccttcaaagaggggatactaggcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caacagcatccaaagatgtggggacaataatggccttcaaagaggggatactaggcttct 260
Query: 61 taagatcaaatgattaattttgacaagtaaagactatgacatttttacttcaacgtcaca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 taagatcaaatgattaattttgacaagtaaagactatgacatttttacttcatcgtcaca 320
Query: 121 gagccagtctgctgtgatttggatttgaactgtgtccctcaaaggacaatgtggtaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagccagtctgctgtgatttggatttgaactgtgtccctcaaaggacaatgtggtaaaga 380
Query: 181 cttgacccgtagccatgcccctattgaaaagtagtgaaaacctttgagaagtagaattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgacccgtagccatgcccctattgaaaagtagtgaaaacctttgagaagtagaattct 440
Query: 241 tgaggctaactgaaggaaggttaatagtctcctgatcttgaaactactataaggcttaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaggctaactgaaggaaggttaatagtctcctgatcttgaaactactataaggcttaaa 500
Query: 301 gttgcctccacaacacgctcttactgtgtggcactaagccaccacaggcccaaagcagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttgcctccacaacacgctcttactgtgtggcactaagccaccacaggcccaaagcagta 560
Query: 361 gagccaggtgactccccagaaatcatctgaaactgagccatagtaaacctttgctgcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagccaggtgactccccagaaatcatctgaaactgagccatagtaaacctttgctgcttc 620
Query: 421 taagtcacttgcctctggcaacttttgtcaccaaaagttaaccccaggtcctagaagaca 480
||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 621 taagtcacttgcctctggcaacttttgtcactgaaagttaaccccaggtcttagaagaca 680
Query: 481 gctgacataccaaaaggaagcatgctacctcatcctggagagcag 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gctgacataccaaaaggaagcatgctacctcatcctggagagcag 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
