Query= MSMg01no523_n18.b1 MSMg01no523_n18.b1 CHROMAT_FILE:
MSMg01no523_n18.b1 PHD_FILE: MSMg01no523_n18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:55 2005
(644 letters)
>mm_chr14_27125941_27126983
Length = 1043
Score = 1077 bits (557), Expect = 0.0
Identities = 620/643 (96%), Gaps = 7/643 (1%)
Strand = Plus / Minus
Query: 5 gaattctctcatctgcgggcagccatatcttagggtacaaaatttagcatttgcatacac 64
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 925 gaattctctcatctgggggcagccatatcttggggtacaaaatttagcatttgcatacac 866
Query: 65 aggaccagaccaacctccaacaaaatccctcaaatggagcacccgttaacatatttacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 aggaccagaccaacctccaacaaaatccctcaaatggagcacccgttaacatatttacat 806
Query: 125 gagagcatcatatggagagattctagcattaagtgaggaatgggaaaccagatgtcttag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gagagcatcatatggagagattctagcattaagtgaggaatgggaaaccagatgtcttag 746
Query: 185 cttttgtgggtcaagacctggcaccctcattcacatgaagctcagaagacaatttgtggc 244
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 745 tttttgtgggtcaagacctggcaccctcatccacatgaagctcagaagacaatttgtggc 686
Query: 245 aggtttggtctttccatcaacctcataggtcccagggaaggaaccaatttctttaggttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aggtttggtctttccatcaacctcataggtcccagggaaggaaccaatttctttaggttt 626
Query: 305 ggaattaatacatttagctactgaaacatctcaccaaccaatcacctcaaccacaaattt 364
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 625 ggaattattacatttagctactgaaacatctcgccaaccaatcacctcaaccacaaattt 566
Query: 365 aataagctatatatctatatttatgttctctgtgtatatctgtcttgcatttataaagag 424
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 565 aataagctatatatctatatttatgttctctgtgtatatctgtcttgcacttataaagag 506
Query: 425 tagattttttttttt-acccttggtctgacagcaccagtctggggacccccaggactact 483
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagattttttttttttacccttggtctgacagcaccagtctggggacccccaggactact 446
Query: 484 tttttcacacactaactttctgactcgctgtcagtctaggaaggcagatgcattacaggg 543
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 ttcttcacacactaactttctgactc--tgtcagtctaggaaggcagatgcattacaggg 388
Query: 544 gagcctcacaagaatagtgca--gtcatctggaagaaatacttcctaatatcctctgagc 601
||||| |||||||||| || ||||||||||||||| |||||||||||||||||||||
Sbjct: 387 tagccttacaagaatag--caccgtcatctggaagaaacacttcctaatatcctctgagc 330
Query: 602 tctgctgtggcacaagagcagtattgaccatccctcctccttc 644
|||||||||| |||||||||| || ||||||||||| |||||
Sbjct: 329 tctgctgtggtacaagagcagcatcaaccatccctcccccttc 287
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1043
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1033
Effective search space: 654922
Effective search space used: 654922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_n18.g1 MSMg01no523_n18.g1 CHROMAT_FILE:
MSMg01no523_n18.g1 PHD_FILE: MSMg01no523_n18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:55 2005
(658 letters)
>mm_chr14_26668952_26670009
Length = 1058
Score = 1259 bits (651), Expect = 0.0
Identities = 657/659 (99%), Gaps = 1/659 (0%)
Strand = Plus / Plus
Query: 1 ccagttggtagtgtcgtggacaggctgactgcttcaggttgagtcctggttttaggggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ccagttggtagtgtcgtggacaggctgactgcttcaggttgagtcctggttttaggggac 259
Query: 61 tgtgactagcagaggacagcaaatgtctcttttcgactgcatgaagtcctccttgtagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgtgactagcagaggacagcaaatgtctcttttcgactgcatgaagtcctccttgtagct 319
Query: 121 gatagtgttaaagtgtaccttcaaattcaacgtgatcttttcttatcactgagagatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gatagtgttaaagtgtaccttcaaattcaacgtgatcttttcttatcactgagagatgta 379
Query: 181 tcagaaattcccactataaaaccaattctggtggcatggaccagtagtcatagtgtgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcagaaattcccactataaaaccaattctggtggcatggaccagtagtcatagtgtgctg 439
Query: 241 gaggctgaggcaggaggctcatgagttcaggaccaacatggactgtatataaagtttaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaggctgaggcaggaggctcatgagttcaggaccaacatggactgtatataaagtttaag 499
Query: 301 gccggcctaggttgtatataatcagtccttaaaaaaaaaaa-gactaaataattctcact 359
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 500 gccggcctaggttgtatataatcagtccttaaaaaaaaaaaagactaaataattctcact 559
Query: 360 gtaaatcaagctcaatttgtccttggcaatggttctggcttttacgaacttggctttcat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtaaatcaagctcaatttgtccttggcaatggttctggcttttacgaacttggctttcat 619
Query: 420 gtttcgagttaacaggtttttcaggcctgctttgtggtttgtattgtgtgatctttggtg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtttcgagttaacaggtttttcaggcctgctttgtggtttgtattgtgtgatctttggtg 679
Query: 480 ttcaggtctgtattatttatgttttaggaatagccaagaggtgggataatgtcttttctt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttcaggtctgtattatttatgttttaggaatagccaagaggtgggataatgtcttttctt 739
Query: 540 acaatcctaaaattaataaaaacacattttatgaaacagcaggacccacgcgtttagagg 599
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 740 acaatcctaaaattaataaaaacacattttatgaaacagcaggacccaggcgtttagagg 799
Query: 600 cagtgtcctgacagacttcaggctatgcccctgtgcccttcaagctaggcactggtgga 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cagtgtcctgacagacttcaggctatgcccctgtgcccttcaagctaggcactggtgga 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
