Query= MSMg01no526_h15.b1 MSMg01no526_h15.b1 CHROMAT_FILE:
MSMg01no526_h15.b1 PHD_FILE: MSMg01no526_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:25 2005
(514 letters)
>mm_chr14_107235817_107236730
Length = 914
Score = 851 bits (440), Expect = 0.0
Identities = 480/510 (94%), Gaps = 27/510 (5%)
Strand = Plus / Plus
Query: 5 gaattcattgtaatattatcaaagaaccattcatccatgctaacttactatatagagctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattgtaatattatcaaagaaccattcatccatgctaacttactatatagagctt 264
Query: 65 tattttcagacaagtctaataaatacaccagtgatccaggaattagaatctctttatctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tattttcagacaagtctaataaatacaccagtgatccaggaattagaatctctttatctc 324
Query: 125 ttccttttttccttccttccttccttccttccttccttccttacatacttacttccttcc 184
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttccttttttccttccttccttccttccttccttccttcctt------------------ 366
Query: 185 ttccttccttccttccttccttttttccttccttccctccttcattccttcctttctttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 --ccttccttccttccttccttttttccttccttccctccttcattccttcctttctttt 424
Query: 245 ttcttttttctttctttcttaatggatattgtatttatttacatttcaagtgttatcccc 304
|||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttcttt-------ctttcttaatggatattgtatttatttacatttcaagtgttatcccc 477
Query: 305 ttttccagttttccctccggaaaccccctatgccatcctctctcatcctgcttctatgaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ttttccagttttccctccggaaaccccctatgccatcctctctcatcctgcttctatgaa 537
Query: 365 ggtgcacacccacccacccacccactcctgcctcccagccttggcattcccctacactgg 424
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ggtgcacacccacccaccctcccactcctgcctcccagccttggcattcccctacactgg 597
Query: 425 gacattgagccttcctgtgaccaaggggctttcctcccattgatacccaataaggccatc 484
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 598 gacattgagccttcctgtgaccaaaggtctttcctcccattgatacccaataaggccatc 657
Query: 485 ttctgctccatatgcagctggggcaatggg 514
||||||||||||||||||||||||||||||
Sbjct: 658 ttctgctccatatgcagctggggcaatggg 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_h15.g1 MSMg01no526_h15.g1 CHROMAT_FILE:
MSMg01no526_h15.g1 PHD_FILE: MSMg01no526_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:25 2005
(652 letters)
>mm_chr14_107429980_107431031
Length = 1052
Score = 629 bits (325), Expect = 0.0
Identities = 385/405 (95%), Gaps = 3/405 (0%)
Strand = Plus / Minus
Query: 246 gtcttgtaaattcataagtgattaaatgtatagtggaaataagaaagttaaatttagcca 305
||||| |||||||||||||||||| || ||||||||||||||||||| || |||||||||
Sbjct: 1052 gtcttataaattcataagtgattacatttatagtggaaataagaaagatacatttagcca 993
Query: 306 ggtagtggtggcacatgcctttaatctcagaacttgggaggcagaggcaggtggatttct 365
|||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||||||
Sbjct: 992 ggtagtggtggcacatgcctttaatcccagcacttgggtggcagaggaaggtggatttct 933
Query: 366 aagttcaaggccagcttggtctacagagtgagttccaggacatccagtactacacagaga 425
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 932 aagttcgaggccagcttggtctacagagtgagttccaggacagccagtactacacagaga 873
Query: 426 aaccctgtctcaagaaaaaaaaa-agataaatgtaatactcttactatttatagctacta 484
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 872 aaccctgtctcaagaaaaaaaaatagataaatttaatactcttactatttatagctacta 813
Query: 485 aaactcag-ttttttaaaaatatatttgcagtattcttttgtcccccaatcctattgcca 543
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 aaactc-gtttttttaaaaatatatttgcagtattcttttgtcccccaatcctattgcca 754
Query: 544 gtttccctgaaatatggtgtaccctctaaggaaatataactttgtcctgccaatggatgg 603
||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 753 gtttccctgtaatatggtgtaccccctaaggaaatataactttgtcctgctgatggatgg 694
Query: 604 tagatagttgggcaaggtttcactcataaaggaacatatgattta 648
|||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 693 tagatagttgggcaaggtttcactcataaaggaacatacgattta 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
