Query= MSMg01no527_i06.b1 MSMg01no527_i06.b1 CHROMAT_FILE:
MSMg01no527_i06.b1 PHD_FILE: MSMg01no527_i06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:46 2005
(683 letters)
>mm_chr14_82514436_82515518
Length = 1083
Score = 1230 bits (636), Expect = 0.0
Identities = 668/686 (97%), Gaps = 12/686 (1%)
Strand = Plus / Plus
Query: 5 gaattcacaataaaggaagtgttaacattatactatatgagctactttagagtatataat 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacaagaaaggaagtgttaacattatactatatgagctactttagagtatataat 264
Query: 65 tctaaagtggctattgatagatataatgatcacgtctcctgcccttcatggcaatgtaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctaaagtggctattgatagatataatgatcacgtctcctgcccttcatggcaatgtaat 324
Query: 125 tttgtgatggaaaaggagatgaatacttataattgcaaaggcaaaattaaagagaggcga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttgtgatggaaaaggagatgaatacttataattgcaaaggcaaaattaaagagaggcga 384
Query: 185 tttagagaacatgttggacaatgactcatcatttaattgcagaattatctatgtctagcc 244
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 385 tttagagaacatgttggacaatgactcatcgtttaattgcagaattatctatgtctagcc 444
Query: 245 ttttcatgttcttatagaaaatgaaattagaactgattatcctgtcctagaatttatagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttcatgttcttatagaaaatgaaattagaactgattatcctgtcctagaatttatagt 504
Query: 305 aactacatgcatagatgagtagtatgctgtagtattatttatagagatacgttgttttca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aactacatgcatagatgagtagtatgctgtagtattatttatagagatacgttgttttca 564
Query: 365 atgcttataaatatgtgattgaatgatgatatgttaagttagggaagtgtattactttat 424
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 565 atgcttataaatatgtgattgaatgatgatatgttaagttagggaactgtattactttat 624
Query: 425 ttaatttttattttgagaaatagcccaagaaaaagtaagttttaatgctatatcaagaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 625 ttaatttttattttgagaaatagcccaagaaaaagtaagttttaatgctatgtcaagaca 684
Query: 485 ggttgaaaatctatcattttcttaaagttaaattttaatatacatttatttttaatgtat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggttgaaaatctatcattttcttaaagttaaattttaatatacatttatttttaatgtat 744
Query: 545 tcaatattttcattcctctttatttttcataactaanattgtgtccactggtgtgcatgt 604
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 745 tcaatattttcattc-----tatttttcataactaaaattgtgtccactggtgtgcatgt 799
Query: 605 gtgtgtgtgtgtgtgtgtn-------gtgtgtgtttgtgatgcttcaattattaagcaaa 657
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 800 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgatgcttcaattattaagcaaa 859
Query: 658 catttctaacttgaaagcttcattaa 683
||||||||||||||||||||||||||
Sbjct: 860 catttctaacttgaaagcttcattaa 885
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_i06.g1 MSMg01no527_i06.g1 CHROMAT_FILE:
MSMg01no527_i06.g1 PHD_FILE: MSMg01no527_i06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:46 2005
(646 letters)
>mm_chr14_82719237_82720282
Length = 1046
Score = 1210 bits (626), Expect = 0.0
Identities = 641/646 (99%)
Strand = Plus / Minus
Query: 1 taatctcgaattatgcaaaaagcttgcattttaaagtgaaatataaatgttagttttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 taatctcgaattatgcaaaaagcttgcattttaaagtgaaatataaatgttagttttgtt 787
Query: 61 ttctgatatttaattattatttcaatattatgtattgtataagttgaggatatgttttta 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ttctgatatttaattattatttcaatattatgtattgtataagttgaggatatgtttttg 727
Query: 121 tgatttttataatttgtgtagatttcaaagtttttcatagatatagtctcagtttagtta 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 726 tgatttttataatttgtgtagatttcaaagtttttcatagaaatagtctcagtttagtta 667
Query: 181 aatacctgataaaatatgaaaatctttttatgtaaagtcattctaggttcattattaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 aatacctgataaaatatgaaaatctttttatgtaaagtcattctaggttcattattaaga 607
Query: 241 caagagttggcaaaaattttacagtattttgtcttaacaatttcagttttcatgcataga 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 caagagttggcaaaaatttcacagtattttgtcttaacaatttcagttttcatgcataga 547
Query: 301 acacagcatgttgacttaaggggaaccagtgttcatagaaagtatagagaatttcaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 acacagcatgttgacttaaggggaaccagtgttcatagaaagtatagagaatttcaaatt 487
Query: 361 gaataaaaagtgggtaaaaccttttagaaccttagcaaacatttccttagagacaacatt 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 486 gaataaaaagtgggtaaaaccttttagaaccttagcaaacatgtccttagagacaacatt 427
Query: 421 gtgtgcatctagaacataattaagtaaatgtagctacttctatttcttttatactttaga 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 426 gtgtgcatctagaacataattaagtaaatgtagctatttctatttcttttatactttaga 367
Query: 481 gtcacaagaccacctctaccatttttgttttcatatattgctttccctttattgttgcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gtcacaagaccacctctaccatttttgttttcatatattgctttccctttattgttgcag 307
Query: 541 caatttcctgaggcactgaacgttttccctgtagatttttcactgatctctttgaagaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 caatttcctgaggcactgaacgttttccctgtagatttttcactgatctctttgaagaat 247
Query: 601 tcattgactgttgtcacatgccactctgctgctatagtccaaggga 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tcattgactgttgtcacatgccactctgctgctatagtccaaggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
