TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTAAATTCTAAAAAATAATTAGAAAAATATGCTTAAAGGTTTAT
TTTATTGAAAATGAAAACAGGGCTTTGCAAGCCTGAACTAGTCATGCCCT
ACTGTTTAAAAAAGTAAATAAATAAAAATAAAAACTTCACAATAAATAAG
ACTCAGAACTCAGAGTAGGATGCAGGATCCATGCTGACTACGGGGAGACA
TATCTGAAGGCCAGATAACACCTGTATAGTGAATCACTCCTGCCTCACGC
TACCAAGTAGAGCACTGAACCTTTGCAAACACACAGCGGGCTTCTCCAAC
ACCCAGAGCTGACTCTGCTCTTCTTAGATGCAAGTCTCTGCACACTTACC
CAAATAAGTACTGAGAGAAAAGCCACTTGACCCGTGAGCTAGTAAAACTT
GAGTAGAGAGCACCAAACCAGTGCTCAGTGAACACTGGTGTGACTCAGGG
GAGCACTGATCCAAATCCTTCCTGCCAACCTGCTAGCTGTAGGCTTAGGA
GCCAGTTGCTTATTTTCTCGAAACCACAGCTATATCAACTGGAATGGGAT
CATGGGATCTATTGCCAGGCTTACAGAGACTGACTAATTTCTATACGTGG
GAGGAGAGTTTGCTGCTAGCATAGGGAACCCTTGGCTTAGCGATGTTTCT
GTTTTATTACTCTTGTTTATTACCCATAAAAAGGCAGGAACATGTTTGCT
TGCTTTGTTGCTGGACATTATTTTACTTGCATCTGTCACTGGGGATCAAA

CGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTAGATTTTGTAATGGCCATAGTAG
TGTTGCTGGGTTTCTGACCAGGGTAAGAAAAAGACTTGAAGCATCCCTTC
CCCTGAGGAAGATATACAAGGGTATAGTATAGAATAGAGTTTATTCAGGA
CAAGGGGAGGGGAGTCAAGAGGGTAATAGAGGCATAGAAAGGGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAATAGAGAAGTNNAGGAGGAGAGGTCGGC
TTTGAGTGCTTGAATTGTTGATGGGGAANAGACTGGGTGATGTAATGGTG
TAGTGGATTGGGAATGANAATGGTTAAATTAAATGGTGAGATAACTTAAG
ATGTAAGGATGTGAGGAAATTATCAGTGATGTAGATTATTCTTTGTTGTA
TGTTGTGATACATCTTGTACTCATGTCGAAGGCAAATGGTCCAGATCTTT
TCAGCTTGTTGGTCCATGATGTCGTGTCCTTACATTCTTTATTCCCTGTG
GCAAATGAAACAATTTCTCCTGTTTTGTTTATATATTTCCCACCCCGTTT
TAATTTCTGTTTTTTTTCCCTCGGCCTTTTTTGTTTTACCTCTTCTTGTT
TACCTAATTTGATTCTGCCTACCCTTTCTTTTTTTCTCTCGTGGTTTGTT
TTGCGTTCCTTTGTATATTGGCTCCCCTTTTGTTTTTTTG

Query= MSMg01no527_n19.b1 MSMg01no527_n19.b1 CHROMAT_FILE:
MSMg01no527_n19.b1 PHD_FILE: MSMg01no527_n19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:17 2005
         (601 letters)



>mm_chr14_28695131_28696131
          Length = 1001

 Score = 1104 bits (571), Expect = 0.0
 Identities = 589/597 (98%), Gaps = 4/597 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattaaattctaaaaaataattagaaaaatatgcttaaaggtttattttattgaa 64
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 765 gaattcattaaattctaaaaaataattagaaaaatatgtttaaaggtttattttattgaa 706

                                                                       
Query: 65  aatgaaaacagggctttgcaagcctgaactagtcatgccctactgtttaaaaaagtaaat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||
Sbjct: 705 aatgaaaacagggctttgcaagcctgaactagtcatgccctactgtttaaaa----aaat 650

                                                                       
Query: 125 aaataaaaataaaaacttcacaataaataagactcagaactcagagtaggatgcaggatc 184
           ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 649 aaataaaaataaaaacttcacaataaataagactcagaactcagagtgggacgcaggatc 590

                                                                       
Query: 185 catgctgactacggggagacatatctgaaggccagataacacctgtatagtgaatcactc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 catgctgactacggggagacatatctgaaggccagataacacctgtatagtgaatcactc 530

                                                                       
Query: 245 ctgcctcacgctaccaagtagagcactgaacctttgcaaacacacagcgggcttctccaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ctgcctcacgctaccaagtagagcactgaacctttgcaaacacacagcgggcttctccaa 470

                                                                       
Query: 305 cacccagagctgactctgctcttcttagatgcaagtctctgcacacttacccaaataagt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 cacccagagctgactctgctcttcttagatgcaagtctctgcacacttacccaaataagt 410

                                                                       
Query: 365 actgagagaaaagccacttgacccgtgagctagtaaaacttgagtagagagcaccaaacc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 actgagagaaaagccacttgacccgtgagctagtaaaacttgagtagagagcaccaaacc 350

                                                                       
Query: 425 agtgctcagtgaacactggtgtgactcaggggagcactgatccaaatccttcctgccaac 484
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 349 agtgctcagtgaacactggtgtgactcaggggagcactcatccaaatccttcctgccaac 290

                                                                       
Query: 485 ctgctagctgtaggcttaggagccagttgcttattttctcgaaaccacagctatatcaac 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ctgctagctgtaggcttaggagccagttgcttattttctcgaaaccacagctatatcaac 230

                                                                    
Query: 545 tggaatgggatcatgggatctattgccaggcttacagagactgactaatttctatac 601
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tggaatgggatcatgggatctattgccaggcttacagagactgactaatttctatac 173


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)