Query= MSMg01no530_b09.b1 MSMg01no530_b09.b1 CHROMAT_FILE:
MSMg01no530_b09.b1 PHD_FILE: MSMg01no530_b09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:17 2005
(722 letters)
>mm_chr14_79183670_79184791
Length = 1122
Score = 1064 bits (550), Expect = 0.0
Identities = 556/558 (99%), Gaps = 2/558 (0%)
Strand = Plus / Minus
Query: 166 acatattataagtaatctagaggcaatttagaacatatgggagaatagtaggggttatgt 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 acatattataagtaatctagaggcaatttagaacatatgggagaatagtaggggttatgt 718
Query: 226 gaactatggcaccattttagtcaaaagacttgagcattctacagattttggcatccacat 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gaactatggcaccattttagtcaaaagacttgagcattctacagattttggcatccacat 658
Query: 286 tgtgggtgtatcttagaaacatgcctgatagacacagatcactgactgcatactaatgaa 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tgtgggtgtatcttagaaacatgcctgatagacacagatcactgactgcatactaatgaa 598
Query: 346 tgtagcacttattttaaatactgaccaatggaaaaaatatccaggctttcttagcatcct 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tgtagcacttattttaaatactgaccaatggaaaaaatatccaggctttcttagcatcct 538
Query: 406 tatgcctgaggagagattctttttatttcctcttctaaaatccctaggaaaagatgttgt 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tatgcctgaggagagattctttttatttcctcttctaaaatccctaggaaaagatgttgt 478
Query: 466 agaaaattttaattccaaagggggtttctaccctgctttaatcattcagttccagaataa 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 agaaaattttaattccaaagggggtttctaccctgctttaatcattcagttccagaataa 418
Query: 526 aggacacacaacttttttttttacttacaataagccttaaacagcacaagggctgggcag 585
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aggacacacaacttttttttt-acttacaataagccttaaacagcacaagggctgggcag 359
Query: 586 acattaccctctatgctattaaaatctatttcttatccttaaccctgagttatcacttac 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 acattaccctctatgctattaaaatctatttcttatccttaaccctgagttatcacttac 299
Query: 646 tatgcatcatttgggctgcttttaactccagttgaccagctctcagggccatgttttctt 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tatgcatcatttgggctgcttttaactccagttgaccagctctcagggccatgttttctt 239
Query: 706 gacttcta-cccatggcg 722
|||||||| |||||||||
Sbjct: 238 gacttctaacccatggcg 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 722
Length of database: 1122
Length adjustment: 10
Effective length of query: 712
Effective length of database: 1112
Effective search space: 791744
Effective search space used: 791744
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no530_b09.g1 MSMg01no530_b09.g1 CHROMAT_FILE:
MSMg01no530_b09.g1 PHD_FILE: MSMg01no530_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:17 2005
(339 letters)
>mm_chr14_78995488_78996226
Length = 739
Score = 592 bits (306), Expect = e-173
Identities = 319/324 (98%), Gaps = 2/324 (0%)
Strand = Plus / Plus
Query: 1 agtgcattgttataaatattgttcacactcattttccttttattttccactatcacttta 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgcattgctataaatattgttcacactcattttccttttattttccactatcacttta 260
Query: 61 tggagtggatgggttctgcacagatgccatgtgtgccaggcatatgtatgaacatcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggagtggatgggttctgcacagatgccatgtgtgccaggcatatgtatgaacatcagaa 320
Query: 121 gataatctgcaagagtcaattctctccttataccagaggtaaaggtgtgtgccaccaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gataatctgcaagagtcaattctctccttataccagaggtaaaggtgtgtgccaccaaac 380
Query: 181 ttgatgaccagagttcaattcccaggacacacatggttgacagaaagaactgactcctgt 240
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 ttgatgaccagagttcaattcccaggacaca--tggttgacagaaagaactgactcctgt 438
Query: 241 aagtcaacctctgaccataccagacatacaagtcatggtatgtgcatgtgtgtgtgtgtg 300
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 439 aagtcaacctctgaccataccagacatacaagtcatggtatgtacatgcgtgtgtgtgtg 498
Query: 301 tgtgtgtgtgtgtgtgtgtgtgtg 324
||||||||||||||||||||||||
Sbjct: 499 tgtgtgtgtgtgtgtgtgtgtgtg 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
