ACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCACTCCATGTCTCTGTCTCTTTATCTCTGCATATTTAATTATTTT
CCACTTAGAACAAGAAACAGAAGAAGCGCCTAGATGGTTTCTGCTGATTA
ATGTGAGCTCAACTCAGGGAGAGACCCCTGATGGACTTCCACTGAGAAAG
AGAAAGGTTCAAACACACCGTAACCTTGGGTGCCTTTCAATGCAGCCTTC
TCTCATTTCATGAAGGCCTCTGCTCCCTAATGTGACCCAGATAACAATGT
CTAGTGGGGGAATTGAAAATATAAATGGAAATGAAGTAAAGGAATCCTCA
TCTAAAGGAATATGAAAAGTATTATTCTATAACTGATTGAATGGGCCCTG
AGGACTTTCTATTGGGAGAGAAAAAAGTGGTAAGTCATTAAGAGGCGCAC
TCAGAGCCGAAACATTTTTCATGTGCATATACAATTACAGGCTTCATTAT
TCCGGGGCCTCCTTTGATTAACAATAAAGCATCGAGGCTTTCAAACCCAA
ATGTGTCACTTGGAGTTTCTGTGTAAAGTCTTAAAGCCTAGTGCTTGTGG
GAGGTTTATGATGATAAGGGAAGAAGAACGCTTCTACATGTACTACTCAA
AGGGCTGGGCTGAGAGTCTGATGATAGATACTTACATACATTTTAAACAG
AAATGTTGGCCTGGGGTTTGTGTGGTCACCAAAAGGTAGAGACTGANGGC
AGATATGTCATGGN

NTTCTCCGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCTGAACTGTCATTCTGA
GACCTTCTTTTGTAGTCACAAATGAATAGAAAAGTGGCTGTAGTGGCTAT
TCCTGGTTGTCAACTTGACAATATTTGGAATGAATTACAATCCGGAATTG
GAAGGCTCACCAGTGACCCTTATCTGGAGGCTTGGAGATCCTTATCTGGA
TCTTGGTTTGAAGATCTTGAGCCACAGTGGCTATGAATTCCAGAAGATTG
AATCTCCGAGTTTAAGGAACACACATTTAATCTGGGCTACGCCTTTCATC
TGGGATTAAAGGTGTGGTGGAACACACCTTTAATCTGGGCTACACCTTCT
GCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTGCTCT
TGCTCCTTCGCCTGCTTGCTGCGTGAGACTGAGTAACTGCTAGATCCTTG
GACTTCCATTCACAGCTGCGACTGAACAATTGTTGGGCATTGGGCTGCCG
ACTATAAGTCATCAATAAATTCCTTTACTATCTAGAGACTATCTGTAAGT
TCTGTGACTCTAGAGAACCCTGACTAATACAGAAGTTGGTACCAGGAGTG
GTTCTAGAGTAACAGAAGTACAAGGATGAATCTTTTAAAATTCTGGAATT
GGCTTGTTGATCCACCAGCACTTTCAACTATTGAAACCTCTCCAGATTC

Query= MSMg01no530_j16.b1 MSMg01no530_j16.b1 CHROMAT_FILE:
MSMg01no530_j16.b1 PHD_FILE: MSMg01no530_j16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:59 2005
         (697 letters)



>mm_chr14_12975469_12976565
          Length = 1097

 Score = 1270 bits (657), Expect = 0.0
 Identities = 685/695 (98%), Gaps = 4/695 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcactccatgtctc--tgtctctttatctctgcatatttaattattttccacttag 62
           |||||||||||||| | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 gaattcactccatg-c-cagtgtctctttatctctgcatatttaattattttccacttag 840

                                                                       
Query: 63  aacaagaaacagaagaagcgcctagatggtttctgctgattaatgtgagctcaactcagg 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 aacaagaaacagaagaagcgcctagatggtttctgctgattaatgtgagctcaactcagg 780

                                                                       
Query: 123 gagagacccctgatggacttccactgagaaagagaaaggttcaaacacaccgtaaccttg 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gagagacccctgatggacttccactgagaaagagaaaggttcaaacacaccgtaaccttg 720

                                                                       
Query: 183 ggtgcctttcaatgcagccttctctcatttcatgaaggcctctgctccctaatgtgaccc 242
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 719 ggtgcctttcaatgcagccttctctcctttcatgaaggcctctgctccctaatgtgaccc 660

                                                                       
Query: 243 agataacaatgtctagtgggggaattgaaaatataaatggaaatgaagtaaaggaatcct 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 agataacaatgtctagtgggggaattgaaaatataaatggaaatgaagtaaaggaatcct 600

                                                                       
Query: 303 catctaaaggaatatgaaaagtattattctataactgattgaatgggccctgaggacttt 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 catctaaaggaatatgaaaagtattattctataactgattgaatgggccctgaggacttt 540

                                                                       
Query: 363 ctattgggagagaaaaaagtggtaagtcattaagaggcgcactcagagccgaaacatttt 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ctattgggagagaaaaaagtggtaagtcattaagaggcgcactcagagccgaaacatttt 480

                                                                       
Query: 423 tcatgtgcatatacaattacaggcttcattattccggggcctcctttgattaacaataaa 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tcatgtgcatatacaattacaggcttcattattccggggcctcctttgattaacaataaa 420

                                                                       
Query: 483 gcatcgaggctttcaaacccaaatgtgtcacttggagtttctgtgtaaagtcttaaagcc 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gcatcgaggctttcaaacccaaatgtgtcacttggagtttctgtgtaaagtcttaaagcc 360

                                                                       
Query: 543 tagtgcttgtgggaggtttatgatgataagggaagaagaacgcttctacatgtactactc 602
           |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 359 tagtgcttgtgggaggtttacgatgataagggaagaagaatgcttctacatgtactactc 300

                                                                       
Query: 603 aaagggctgggctgagagtctgatgatagatacttacatacattttaaacagaaatgttg 662
           |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 299 aaagggctgggctgagggtctgatgatagatacttacatatattttaaacagaaatgttg 240

                                              
Query: 663 gcctggggtttgtgtggtcaccaaaaggtagagac 697
           ||||||||| |||||||||||||||||||||||||
Sbjct: 239 gcctggggtctgtgtggtcaccaaaaggtagagac 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1097
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1087
Effective search space:   746769
Effective search space used:   746769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)