Query= MSMg01no531_f17.b1 MSMg01no531_f17.b1 CHROMAT_FILE:
MSMg01no531_f17.b1 PHD_FILE: MSMg01no531_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:57 2005
(584 letters)
>mm_chr14_45864500_45865483
Length = 984
Score = 1106 bits (572), Expect = 0.0
Identities = 581/584 (99%)
Strand = Plus / Minus
Query: 1 tataatttcattaaacacaaatttaataatctcccatagttacttggcatgctagccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 tataatttcattaaacacaaatttaataatctcccatagttacttggcatgctagccatt 879
Query: 61 atgaacttagtataagaactatttcaagatgcacagattcagccgggcatggtggcacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 atgaacttagtataagaactatttcaagatgcacagattcagccgggcatggtggcacat 819
Query: 121 acctttaattccagcacttgggagtcagaggcagtcattaccttataaataatctcatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 acctttaattccagcacttgggagtcagaggcagtcattaccttataaataatctcatgt 759
Query: 181 ataaaaataaatattgatttctggctttgaaaaaaattttgagccattttaacaccatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ataaaaataaatattgatttctggctttgaaaaaaattttgagccattttaacaccatta 699
Query: 241 tggggaatcatgatttttttttcatttttataactacggagtgcatttgcattggccttc 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 698 tggggaatcatgatttttttttcatttttataactatggagtgcatttgcattggccttc 639
Query: 301 ctattctaataattaccaagtcttaaaatttgtctaggaaattaataggctgtgtctaat 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 638 ctattctaataattaccaagtcttaaaatttgtctaggaaattaatatgctgtgtctaat 579
Query: 361 taattcatcaattttaagagctatgggaaatagttttaaacaatgtttgagcccatgacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 taattcatcaattttaagagctatgggaaatagttttaaacaatgtttgagcccatgacc 519
Query: 421 tgattatctatagcaaacatgtttcaaacttgaccaaaaaagaacacaggaacagaacgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tgattatctatagcaaacatgtttcaaacttgaccaaaaaagaacacaggaacagaacgc 459
Query: 481 gccgttcctaagcactcatctaaaaccccccggaaggaaggtctgtaccgagtagtggtt 540
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 458 gccgttcctaagcactcatctaaaaccccctggaaggaaggtctgtaccgagtagtggtt 399
Query: 541 aacagcaatcttgtgaaaaccaccccaggccaaacacatctgca 584
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aacagcaatcttgtgaaaaccaccccaggccaaacacatctgca 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_f17.g1 MSMg01no531_f17.g1 CHROMAT_FILE:
MSMg01no531_f17.g1 PHD_FILE: MSMg01no531_f17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:57 2005
(619 letters)
>mm_chr14_45707820_45708838
Length = 1019
Score = 350 bits (181), Expect = e-100
Identities = 214/225 (95%)
Strand = Plus / Plus
Query: 291 gttaaggtcacagtccattgttttgactacttctccaggtcattctgttccagatagcaa 350
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 14 gttaaggtcacagtccattgttttgactacttctccaggtcatcctgttccagatagtaa 73
Query: 351 atgaagtcatgcttgcaagtaggtagtaaagcttctacctatttgcatggacagttcttc 410
|||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 74 atgaagtcatacttgcaaataggtagtaaagcttttacctatttgcatggacagttctgc 133
Query: 411 agtccatgattaagggccacactggtgatggcttgctggaaatgtgctgagacaaagcag 470
||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||
Sbjct: 134 agtccatgattaagggccacactagtgatggcttgctggtaatgtgctgcgacaaagcag 193
Query: 471 agtgtgtagggtgagagactggaagcaagctggaatatgtgtctt 515
|||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 194 agtgtgtaaggtgagagactggaagcaagctggaataggtgtctt 238
Score = 223 bits (115), Expect = 4e-62
Identities = 118/119 (99%)
Strand = Plus / Plus
Query: 501 tggaatatgtgtcttgtatggtctcttcttcatcatgaaaagccatcaggactaaatgat 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tggaatatgtgtcttgtatggtctcttcttcatcatgaaaagccatcaggactaaatgat 760
Query: 561 ggacattccattctgatggccttatctaattccagtcactgccccccacaggtcaagat 619
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 761 ggacattccattctgatggccttatctaattccagtcactgacccccacaggtcaagat 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
