Query= MSMg01no532_a14.b1 MSMg01no532_a14.b1 CHROMAT_FILE:
MSMg01no532_a14.b1 PHD_FILE: MSMg01no532_a14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:51 2005
(631 letters)
>mm_chr14_110875492_110876522
Length = 1031
Score = 1058 bits (547), Expect = 0.0
Identities = 592/613 (96%), Gaps = 13/613 (2%)
Strand = Plus / Minus
Query: 20 gaaggagttggtatgctactcggggtaggtatgtgcagaggcctaagcggacacttcact 79
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 gaaggggttggtatgctactcggggtaggtatgtgcagaggcctaagcggacacttcact 966
Query: 80 gattcctattaacaagtaaatttcatggaacagaaaagatttttttctctgtttttggca 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 gattcctattaacaagtaaatttcatggaacagaaaagatttttttctctgtttttggca 906
Query: 140 tttaagtttttccccttaaatagatgtccagaaagaaaaaagatagcggctttataaaat 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tttaagtttttccccttaaatagatgtccagaaagaaaaaagatagcggctttataaaat 846
Query: 200 gagtgtatgtgtatgtatatccacacacattaatatttacatttatatatgtatatgtac 259
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gtgtgtatgtgtatgtatatccacacacattaatatttacatttatatatgtatatgtac 786
Query: 260 acacacacattttatatatatatatatatgtatatgagagactgatcaatggtcatgttt 319
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 785 acacacacattttatatatatatat----gtatatgagagactgatcaatggtcatgttt 730
Query: 320 tctctttcttcctctcactcttgtagactctcctctttacaaatttcacacagactactc 379
||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 729 tctctttcttcctctcactcttgtagactctcctctttacaaatttctcaccggctactc 670
Query: 380 ttcattttgatttgtgttactctctgccttctaggaagcccctgttttcagacca-tcct 438
||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 669 ttcattttgatttgtgttactctctgccttctaggaagcccctgttttcagac-agtcca 611
Query: 439 gttaacttactatgtaccatattccttttcattttctattaacaatatttatattaccag 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gttaacttactatgtaccatattccttttcattttctattaacaatatttatattaccag 551
Query: 499 atattttacataaactttgaaattagttggatagtctgactattgtttagaataaggaat 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atattttacataaactttgaaattagttggatagtctgactattgtttagaataag---- 495
Query: 559 aagcacagaagatggtattgaagaacacatctgatatagacatgtattctacagttttta 618
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 494 ---cacagaagatggtattgaagaacacatcagatatagacatgtattctacagttttta 438
Query: 619 aacagttaatgac 631
| |||||||||||
Sbjct: 437 accagttaatgac 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_a14.g1 MSMg01no532_a14.g1 CHROMAT_FILE:
MSMg01no532_a14.g1 PHD_FILE: MSMg01no532_a14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:51 2005
(637 letters)
>mm_chr14_110714178_110715208
Length = 1031
Score = 1164 bits (602), Expect = 0.0
Identities = 626/637 (98%), Gaps = 6/637 (0%)
Strand = Plus / Plus
Query: 1 attaaacaatgacatttaaaacagtttttcagtatgaaacaatttaatgacactattaat 60
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaaacaatgacatttaaaa--gtttttcagtatgaaacaatttaatgacactattaat 258
Query: 61 actgaatgaagtttttgctcaaatcacttccctgtttcctaattactctgaccatttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 actgaatgaagtttttgctcaaatcacttccctgtttcctaattactctgaccatttaaa 318
Query: 121 tcatttagttacaatagaactggaactaaaaagtaaagaaataaaattaatgtcaagaca 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 319 tcatttagttacaatagaactggagctaaaaagtaaagaaataaaattaatgtcaagaca 378
Query: 181 gtaatcagcatgagaggatcgattgctgttaacattaataaaactgcaatgattaactca 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtaatcaggatgagaggatcgattgctgttaacattaataaaactgcaatgattaactca 438
Query: 241 ctgtttataaaaagaggaatatttactctctaaaattatatttgaaaataaagcattctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctgtttataaaaagaggaatatttactctctaaaattatatttgaaaataaagcattctg 498
Query: 301 taatttcataatgaattgcaatctaaaccttttcaagttttagtagttccaaaggaattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 taatttcataatgaattgcaatctaaaccttttcaagttttagtagttccaaaggaattg 558
Query: 361 tggggacaccatcactttttgtaattttcattcagatacataaaatacaggttgttattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tggggacaccatcactttttgtaattttcattcagatacataaaatacaggttgttattt 618
Query: 421 taatttttttctctttagtactttgtagttaactacagggaaactatatgataaatcttc 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 taattttcttctctttagtactttgtagttaactacagggaaactatatgataaatcttc 678
Query: 481 aacttaataaagtcagaaaacaaaatccaatgaaatttagaaaacacacacacacacaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aacttaataaagtcagaaaacaaaatccaatgaaatttagaaaacacacacacacaca-- 736
Query: 541 catacttgatcatagaacaaaattctggaatgtaagtccatgaataanaataataaagta 600
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 737 --tacttgatcatagaactaaattctggaatgtaagtccatgaataaaaataataaagta 794
Query: 601 tcacatttagtttatagaaaaataaagtatgtataaa 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 795 tcacatttagtttatagaaaaataaagtatgtataaa 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1031
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1021
Effective search space: 640167
Effective search space used: 640167
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
